Natrinema thermotolerans: DVR14_13860
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Entry
DVR14_13860 CDS
T05948
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hjt
Natrinema thermotolerans
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hjt03016
]
DVR14_13860
Enzymes [BR:
hjt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DVR14_13860
Transfer RNA biogenesis [BR:
hjt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVR14_13860
Prokaryotic type
DVR14_13860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DUF3701
Motif
Other DBs
NCBI-ProteinID:
QCC59654
LinkDB
All DBs
Position
2404469..2405377
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AA seq
302 aa
AA seq
DB search
MSLRGPPAERSPAELLTFGVVNLDKPPGPSSHQVSGWLRDAVAETLADRGAAATIDRAAH
AGTLDPKVTGCLPVMLGDATRLAQVFLEGAKEYTAVLECHAPVPADAESVVAEFEGPIYQ
KPPRKSAVARRLRVREIYDLEILKAEERRLLLRIRCESGTYVRKLCHDLGLALGTGGHMG
HLRRTATDPFDDRTLHSAHDFLDALAFWVEDDDPEPLFDVVDPAERILEGIPSVVVAESA
AREIAHGAPVYGPGVIEADDGIEQGSLVACYTPDDAAVCLGELVASPDADEGVVVDLERV
LV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgtggcccaccggcggagcgatcacccgccgagttactcaccttcggcgtc
gtcaatctcgataagccgcccggtccgtcctcgcatcaggtcagcgggtggcttcgcgac
gcggtcgcggagacgctcgccgatcgcggggcagcggcgacgatcgatcgcgccgcccac
gcggggacgctcgatcccaaagtaaccggctgcttgccggtcatgctcggcgatgcgacc
cgcctcgcacaggtgtttctcgagggggcaaaggagtacactgccgtcctcgagtgccac
gcgccggtgccggccgacgcggaatcagtcgtcgccgagttcgaggggccgatctatcag
aagccgccgcggaaaagcgccgttgcgcgtcgcctgcgcgtgcgcgagatctacgacctc
gagatcctcaaggccgaggagcgccggctcctgttgcggatccgctgtgagagcggtacc
tacgtccgcaagctgtgtcacgatctggggctggcgcttggcaccggcgggcacatgggc
cacctgcgtcggaccgccaccgatccgttcgacgatcggacgctgcattcggcccacgac
ttcctcgatgcgctggcattctgggtcgaagacgacgatcccgagccgctgttcgacgtc
gtcgaccccgccgaacgcatcctcgagggaatccccagcgtcgtcgtcgcggagtcggcc
gcccgcgagatcgcacatggtgcgccggtctacggccccggcgtcatcgaggccgacgac
gggatcgagcaggggtcgctggtcgcctgttacacgcccgacgacgcagcggtctgtctg
ggcgaactggtcgcgagcccggacgccgacgagggcgtcgtcgtcgacctcgagcgagta
ctcgtctag
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integrated database retrieval system
