Natrinema thermotolerans: DVR14_18995
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Entry
DVR14_18995 CDS
T05948
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hjt
Natrinema thermotolerans
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hjt03000
]
DVR14_18995
Transcription factors [BR:
hjt03000
]
Prokaryotic type
Helix-turn-helix
Other families
DVR14_18995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
GAF_2
BAT
HTH_10
PAS
PAS_9
GAF
GAF_3
PAS_3
PAS_8
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QCC60609
LinkDB
All DBs
Position
complement(3448190..3451354)
Genome browser
AA seq
1054 aa
AA seq
DB search
MTRGFTATEPTPVRALVVGSSEWARSTAEFADERLTVTGPVTGVDDLADDRLEAADCVLT
DDPTVVDELAGSCPVVYALDPTGDESIDDVRRGATDVIAATTARNPALLAHRLERAVATD
ARAATADGPPVRGPEWYRIILEYSSEVVLTIEADGEISYASPAVEVAGGYDPTALRGDHY
LDHVHEDDTAAVAAEFEAVREADLGTSRSVEYTCQHADGAWYVHEAVLTNRLGDGVVDGV
VASIRDITEYHRIERELSESFKRVTDAFYALDSDWEFTYVNDRALEILSTDRSELLGRHI
LEVFPEMTGTAFQSAATEAMAEQESRTVEGYLDAYDAWIEARIYPSPSGMSVYWRDVTDR
VQRKRDLTERTERLQTLVENAPIVLFVLDEDGTFTLSEGRGLANLGTDAGEVVGDSFFDQ
LGDYPDICDDARRALEGADVHSRRELSDRVFEMWYRPITNGGDVDRVIGVASDITERVQY
QEALNGLHEASSHLLSVDSKAAACESIVEVATDVLDLDSVVYRFDERANELRPAAHASAF
ESTFGSPPRIEPDGSIVWETFVNGETAIYDDTRDSTAVSDEETAARSVLSVPLGEHGVVV
ALSTDPAAYDDETVELAELFARAAEAALDRIGRTRRLRDRERELEAQNRHLERLNDANEI
RQGIEELLLKADSRAEIERGVPRRLAALESCSLAWFGEPDPGGNHLQVRASEGADRGYLE
AVTATTVDDSAAEPAGRAARTQAPVYVENVADAVHDGEWRRKALSRNFQSVYAVPLVYDG
FCYGVVSIYGEERDAVDETLRSMLSELGETIAYAIDAVKRKNALFGDDRTEVELAVAADT
TLCQLAARLGSPVRYEGATAPDEGPQLVFAAIEGPIDDPASAVDLAAVDGISEITTIADH
EGETLVQLRMTDSFLGSIAGTHGARLREFSVDESGGRAVVDVPDAVEIRELLADITRSGP
SVSMVARREAPTDDPETVGGATRTVLLESFTDRQREVVQTAYHGGFFEWPRRATGEEIAD
SLDISSPAFHKHVRSAERKLFAALFDGTTTEEVN
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcggtttcacggcgaccgaaccgacgccggttcgcgcgctcgtcgtcggttcg
tccgagtgggcccggtcgacggcggagttcgccgacgaacggctgacggtgacggggccg
gtcacgggggtcgacgacctcgccgacgatcgactcgaggcggccgactgcgtcctgacc
gacgacccgaccgtcgtcgacgaactcgccgggtcgtgtccggtcgtctacgccctcgac
ccgacgggagacgaatcgatcgacgacgtccggcgaggggcgaccgacgtgatcgccgcg
acgaccgcccggaacccggcgctgctggctcatcggctcgagcgggcggtcgccaccgac
gcgcgggcagcgacggcggacggaccgcccgttcgtgggccggagtggtaccggatcatt
ctcgagtactcctcggaagtggtactcacgatcgaggccgacggggagatatcctacgcc
agcccggcggtcgaagtcgccggtggctacgatcccaccgccctccgtggcgatcactat
ctcgatcacgtccacgaggacgatacggcggcggtcgcggccgagttcgaggcggtccgc
gaggccgacctgggcacctcccggtccgtcgagtacacgtgccagcacgccgacggcgcg
tggtacgtccacgaggccgtcctcaccaaccggctcggggacggcgtcgtcgacggcgtc
gtcgcgtcgatccgggatatcacggagtaccaccgcatcgagcgggaactgagcgagtcg
ttcaaacgcgtcaccgacgccttctacgccctcgattcggactgggaattcacctacgtc
aacgatcgcgccctcgagatcctctctaccgaccgctccgagttgctcggccgacacatc
ctcgaggtgttcccggaaatgaccgggacggcgtttcagtccgcggccaccgaagcgatg
gccgagcaggagtcccggaccgtcgagggctacctcgacgcctacgacgcgtggatcgag
gcgcggatctacccgtcgccgtcggggatgtcggtctactggcgggacgtcaccgaccgc
gtccagcgaaagcgggacctgaccgaacggaccgagcgactacagacgttggtcgagaac
gcaccgatcgtcctgttcgtcctcgacgaggacgggacgttcacgctctcggaggggcgc
gggctcgcgaacctcggcaccgatgccggcgaggtcgtcggtgactcctttttcgaccag
ctcggggactatccggacatctgtgacgacgcgagacgtgccctcgagggcgcggacgtc
cactcccggcgggaactctcggaccgggtcttcgagatgtggtatcgaccgatcaccaac
ggcggcgacgtcgaccgcgtgatcggcgtcgcaagcgacatcaccgaacgggtacagtat
caagaggcgctcaacggactccacgaggcgagcagccatctgttgagcgtcgactcgaag
gcagccgcctgcgagtccatcgtcgaggtcgcgaccgacgttctcgacctcgacagcgtc
gtctaccggttcgacgagcgcgcgaacgaactccggccggcggcccacgcgtcggcgttc
gagtcgaccttcggttcgccgccacggatcgagccggacgggagcatcgtttgggagacg
ttcgtgaacggcgagacggcgatctacgacgacactcgagattcgaccgcggtgtccgac
gaagaaacggccgcacggagcgtcctctccgtcccgctgggcgaacacggcgtggtcgtc
gcgctgtcgaccgacccggccgcctacgacgacgagacggtcgaactcgcggagctgttc
gctcgagccgcggaggcggcgctcgatcggatcggccggacgcgtcggctccgcgaccgc
gaacgcgaactcgaggcacagaaccgccacctcgagcggcttaacgacgccaacgagatc
cggcaggggatcgaggaactcctgttgaaggcggactcccgggccgagatcgaacgcggc
gtcccccggcggctggccgccctcgagtcgtgttcgctggcctggttcggggagcccgac
cccggcgggaaccacctgcaggtgcgggccagtgagggggccgatcgggggtatctcgag
gcggtgacggcgacgacggtcgacgattcggcggccgaacccgcggggcgggcggcgcga
acgcaggccccggtctacgtcgagaacgtcgccgacgcggtccacgacggggagtggcga
cggaaggcgctctcccggaacttccagtcggtgtatgcggtcccgctggtctacgacggg
ttctgctacggtgtcgtctcgatctatggcgaggagcgcgacgccgtcgacgagacgctt
cgctcgatgctgtcggaactcggcgagacgatcgcctacgcgatcgacgccgtcaaacgc
aagaacgcgctgttcggcgacgaccgcaccgaggtcgaactcgcagtcgcagccgacacg
acgctgtgtcagttggcggcgcgtctcggatcgcccgtgagatacgagggggcgacggca
ccggacgaggggccacagctcgtcttcgcagcgatcgaagggccgatcgacgatcccgca
tcggccgtcgacctcgccgcggtcgacgggattagcgagatcacgacgatcgccgaccac
gagggggagacgctcgtccagctccggatgaccgattcgttcctcggctcgatcgccggg
acccacggcgcgcggctgcgcgagttctcggtcgacgagtcgggcggtcgcgccgtcgtc
gacgttcccgatgccgtcgagatccgtgaactgcttgccgacatcacccgcagcggtccc
tcggtgtcgatggtcgcgcgacgtgaggccccgaccgacgaccccgagacggtcggcggg
gccacgcggacggtcctcctcgagtcctttactgatcgccagcgagaggtcgtccagacg
gcctatcacggcgggttcttcgagtggccgcgtcgagcgaccggcgaggagatcgccgac
tcgcttgatatctcttcgcccgcgtttcacaagcacgttcggtcggccgagcggaagctg
ttcgcggcgctcttcgacgggacgaccacggaggaggttaattga
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