Natrinema thermotolerans: DVR14_25025
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Entry
DVR14_25025 CDS
T05948
Name
(GenBank) GAF domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hjt
Natrinema thermotolerans
Brite
KEGG Orthology (KO) [BR:
hjt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hjt03000
]
DVR14_25025
Transcription factors [BR:
hjt03000
]
Prokaryotic type
Helix-turn-helix
Other families
DVR14_25025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
GAF
GAF_3
PAS_4
PAS_9
HTH_20
GerE
Sigma70_r4_2
PAS_8
PAS
HTH_24
RsmA_N
Motif
Other DBs
NCBI-ProteinID:
QCC61795
LinkDB
All DBs
Position
unnamed6:973466..975115
Genome browser
AA seq
549 aa
AA seq
DB search
MTDRSDDETTAGGIDSDAMDDRLRRAPIGIIETTTDGRVVDVNDVAATLLETDPSAIRGT
AIGECFPKSADGTLREAFGGPSPTPASFEEYYPLIDRWLAVDVHVDEGTLVYVRDRTPRK
ETEQTVDRIDQRLDRIQRINSLVATVLQQVIGTSDRSDIARTVCEQLGGTDLYRFAWVGD
RSFSEERLRVLAAAGDAANLCERIGESLEDERTVPGQAAVTSGETQRHEAIAEDDTVPRG
IRRAAFGHGLQSCLAVPLAYQGTVYGVVTVYTDREDGFSDQERVALETLGGVAGFAINAG
QQEDLLVADTGTEVTVEVRGETVPFVGAAREADRALSLAGAIPRGDGAVVCYLTADGPLE
GVDESLTDCEAVANVRRIRDETEPLLQATVSGDTPVTALAAWGATIEGGEYGIESARLVA
EVPSDGDVRRLLEAVDAVVSETQLVAKRETTRAPEPTEGFRDTLDEQLTDRQRTVLRTAH
LSDYFTSPRGSSSAEVAETLDIAGSTMLYHLRRAEQKLVEAFFDADSATEAGGSDAAIDD
AEPSATDGT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccggtctgatgacgagacgacggcaggcggtatcgattcggacgcgatggac
gaccgactacgacgggctcccatcgggatcatcgagacgacgaccgacggacgcgtcgtc
gacgtcaacgacgtcgctgcgacgctactggagaccgacccgtccgcgatacgcgggacg
gcgatcggggagtgcttcccgaagtcggccgacgggacgctgcgggaggccttcggcggc
ccgtcgccgacgcccgcctccttcgaggagtactacccgctgatcgaccggtggcttgcg
gtcgacgttcacgtcgacgagggaacgctcgtctacgtccgagaccgcacaccgcgcaag
gaaaccgagcagaccgtcgatcggatcgaccagcgactcgatcggatccagcggatcaac
tcgttggtcgcgaccgtgttacaacaggtaatcggcacgtcggaccgctcggacatcgct
cggacggtctgcgagcagttgggcggcaccgacctctacaggttcgcctgggtcggcgac
cggtcgttctccgaggaacgtctccgagtactcgccgcggctggcgatgcagccaacctg
tgcgagcggatcggcgagagcctcgaggacgagcgcaccgtccccggccaagccgcggtc
acgtccggcgagacgcaacgtcacgaggcgatcgccgaggacgataccgttccccgcggg
atccgtcgagccgcgttcggtcacggcctccagtcgtgtctggcggtcccgctcgcgtac
caagggaccgtctacggcgtcgtaacggtatacaccgaccgggaagacggattcagcgat
caggagcgagtcgccctcgagacgctgggcggcgtcgcagggttcgcgatcaatgccggc
caacaggaggacctactggtcgccgacacgggtaccgaggtaaccgtcgaagtccgcggc
gagacggtcccgttcgtcggtgccgcacgcgaggccgaccgcgccctgtccttggcgggg
gcgatcccgcgcggcgacggcgcggtcgtctgttatctcactgccgacggcccgctcgag
ggcgtcgacgaatcactgaccgactgcgaggccgtcgccaacgtgcggcggatacgggac
gagacggaaccgctcctccaggcgaccgtcagcggcgacacaccggtgaccgcgctcgcg
gcgtggggtgcgacgatcgagggcggcgagtacggcatcgagtcggcccgactcgtcgcc
gaagtcccgtccgacggcgatgtccgacggctgctcgaggccgtcgacgccgtcgtttcg
gagacgcaactggtcgccaaacgggagacgactcgagcgcccgagccgaccgaggggttt
cgagacaccctcgacgagcagttgaccgacagacagcgaacggtgcttcggactgcccac
ctgtcggactacttcacgtcgccgcgcgggagcagttcggcggaggtggcggagacgctc
gacattgccggatcgacgatgctgtatcacctccggcgggcggagcagaaactcgtcgag
gcctttttcgacgccgactcggcgacggaggcaggcggttcggatgcggctatagacgac
gcggaaccgagtgcgaccgacgggacgtga
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