Halomonas kashgarensis: R5M92_01325
Help
Entry
R5M92_01325 CDS
T11163
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hka Halomonas kashgarensis
Pathway
hka00730
Thiamine metabolism
hka01100
Metabolic pathways
hka01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
R5M92_01325 (thiC)
Enzymes [BR:
hka01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
R5M92_01325 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
XAW59982
LinkDB
All DBs
Position
complement(313880..315811)
Genome browser
AA seq
643 aa
AA seq
DB search
MIRTVKSKTAHFLAETAQVDAAAVAPLPGSRKVYVEGSRPDIRVPFREIILSPTKTSGVD
EENPPLLVYDTSGPYTDPNAQIDLRRGLPELRRAWIEERNDTEFMDGPTSQYGQRRANDP
TLAQLRFDLTRTPRRALSTKDGRTGNVTQLHYARQGVITPEMEFIALRENQRRQALGTSE
VERILGHQHAGQSFGASIPDEITPEFVRDEVARGRAIIPNNINHPESEPMIIGRNFLVKI
NGNLGNSAVTSSIEEEVDKMTWGIRWGADTIMDLSTGANIHETREWIIRNSPVPIGTVPI
YQALEKVNGIAENLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTANRVTGIVSRGG
SIMAKWCLYHHQESFLYTHFEEICEICKQYDVAFSLGDGLRPGSIADANDEAQMAELKTL
GELTHIAWKHDVQVMIEGPGHVPMHLVKENMDKQLEYCDEAPFYTLGPLVTDIAPGYDHI
TSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAANLAKGHPAAQRR
DNALSKARFEFRWEDQFNLGLDPDTARAFHDETLPKDSAKVAHFCSMCGPKFCSMKISQE
VRDTYRDRTPENAADSDAEAVKRGMQEQAEKFQREGSELYQEV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggaccgtcaagagtaaaaccgcccactttctcgccgaaaccgcccaggtggat
gccgctgccgtggccccgctgcccggctcgcgcaaggtttacgtggaaggctcgcggcca
gatattcgcgtgccgtttcgggaaatcattctctcgcccaccaaaaccagcggtgtggat
gaagagaacccgccgctgctagtgtacgacacctccggcccctacaccgatcccaacgcc
cagattgatttgcgccggggcctgccagagctgcgccgggcctggatcgaagagcgcaac
gacaccgagtttatggatggccccaccagccagtacggccagcgccgcgccaacgacccc
acccttgcccagctgcgttttgatctgacccgtaccccgcgccgtgcactctctacaaag
gacgggcggactggaaacgtgacccagctgcactacgcacgccaaggcgtcatcacgccg
gagatggagttcatcgccctgcgggaaaaccagcgccgccaggcgctgggaacgtcagag
gttgaacgcatcctgggccaccagcatgcgggccagagctttggcgccagcattccggac
gagataacgccagagttcgttcgcgatgaagtcgccagaggtcgggcgatcattcccaac
aacatcaaccaccctgaaagcgagccgatgatcattggccgcaactttctggtcaaaatc
aacggcaacctgggcaactcggcggtaacctcctccattgaagaggaagtggacaagatg
acctggggcatccgctggggcgcggacaccatcatggacctctccaccggggccaatatc
cacgaaacccgcgaatggatcatccgcaactcaccggtgccgatcggcacggtgcccatt
tatcaggcgctggagaaggtcaacggcatcgccgaaaacctcacctgggaggtctttcgc
gatacgctgatcgagcaggccgaacagggcgtggactacttcaccattcacgcgggggtg
ctgctgcgctacgtgccgctcaccgccaaccgcgtcaccggcattgtgagccgtggcggt
tccatcatggcgaagtggtgcttgtatcaccatcaggagagcttcctgtacacccacttc
gaggagatctgcgagatctgcaagcagtacgacgtggcgttctccctcggcgacggccta
cgccccggctcgattgccgatgccaacgacgaagcgcaaatggccgagctgaaaaccctg
ggcgaactcacccacattgcctggaagcacgatgtgcaggtgatgatcgaaggccccggc
cacgtgcccatgcacctggtgaaagagaacatggacaagcagctggagtactgcgacgaa
gcgcctttctatacgcttgggccgctggtgacggatatagcccccggctacgaccacatt
acttccggcattggtgctgcgatgatcggctggtttggctgtgcaatgctctgctacgtc
acccccaaagagcaccttggcctacccaacaaggatgatgtcaaaaccggcatcatcacc
tacaagattgccgcccacgcggcgaatttggccaagggccacccggcggcgcagcggcgc
gataacgcgctctccaaggcgcgcttcgagttccgctgggaagaccagttcaacctgggc
ttggacccggacacagcccgggcattccacgatgaaaccctgcccaaggactccgccaag
gtggcgcacttctgctccatgtgcgggccaaagttctgctccatgaagatcagccaggaa
gtgcgcgacacctaccgcgatcgcactccggaaaacgctgccgacagcgatgccgaagcg
gtgaagcgcggcatgcaggagcaagcggagaaatttcagcgggaaggcagtgagctgtat
caggaggtataa
DBGET
integrated database retrieval system
