Halomonas kashgarensis: R5M92_02600
Help
Entry
R5M92_02600 CDS
T11163
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hka Halomonas kashgarensis
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hka03032
]
R5M92_02600
03036 Chromosome and associated proteins [BR:
hka03036
]
R5M92_02600
03400 DNA repair and recombination proteins [BR:
hka03400
]
R5M92_02600
DNA replication proteins [BR:
hka03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R5M92_02600
Chromosome and associated proteins [BR:
hka03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
R5M92_02600
DNA repair and recombination proteins [BR:
hka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
R5M92_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
XAW61199
LinkDB
All DBs
Position
complement(583433..583732)
Genome browser
AA seq
99 aa
AA seq
DB search
MMTKSELIEQIAMRQPELSVKEVETAVRLILDDITFALADGGRVEIRGFGSFSLHYREPR
TGRNPKTGDAVELEGKYVPHFKPGKELREQVDASRALGY
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
ctgatgaccaaatcagaattgatcgaacaaatcgcgatgcgccaaccggaactctccgtc
aaggaagtggaaacggcggtccgcctgattctggatgacattaccttcgccctggcggat
ggaggccgagtcgagatacgcggttttggcagcttttcccttcattaccgtgaaccgcgt
actggacgcaatcccaagacgggtgacgccgtggagctggagggaaagtatgttccacac
ttcaagcctggcaaggaattacgcgaacaggtcgatgccagccgagcgctgggttattga
DBGET
integrated database retrieval system
