Halomonas kashgarensis: R5M92_02965
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Entry
R5M92_02965 CDS
T11163
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hka Halomonas kashgarensis
Pathway
hka00071
Fatty acid degradation
hka00280
Valine, leucine and isoleucine degradation
hka00310
Lysine degradation
hka00362
Benzoate degradation
hka00380
Tryptophan metabolism
hka00410
beta-Alanine metabolism
hka00640
Propanoate metabolism
hka00650
Butanoate metabolism
hka00907
Pinene, camphor and geraniol degradation
hka00930
Caprolactam degradation
hka01100
Metabolic pathways
hka01110
Biosynthesis of secondary metabolites
hka01120
Microbial metabolism in diverse environments
hka01200
Carbon metabolism
hka01212
Fatty acid metabolism
Module
hka_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R5M92_02965 (fadB)
00650 Butanoate metabolism
R5M92_02965 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
R5M92_02965 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R5M92_02965 (fadB)
00310 Lysine degradation
R5M92_02965 (fadB)
00380 Tryptophan metabolism
R5M92_02965 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R5M92_02965 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
R5M92_02965 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R5M92_02965 (fadB)
00930 Caprolactam degradation
R5M92_02965 (fadB)
Enzymes [BR:
hka01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R5M92_02965 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
R5M92_02965 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
R5M92_02965 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
R5M92_02965 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
XAW60274
LinkDB
All DBs
Position
663061..665241
Genome browser
AA seq
726 aa
AA seq
DB search
MIYQGNAITVARNGDDIATLTFDLKGESVNKLSSAVVQELGDAVKALENENGLKGLMITS
GKDAFIVGADITEFHGLFDKGEEYLVEMNLKVHDIFNAIEDLPFPTVTAINGLALGGGCE
VLLTTDFRVMGEKAKIGLPETKLGILPGWGGCVRLPRLIGADNAVEWIAGGTENRAADAL
KMGAVDAVVPNDQLEAAALDILARAASGELDYQARRDEKKQPLKLNAIEQMMAFETAKGY
VAGKAGPHYPAPVEAIKVIQKGAGEERARAQAIEAKAFAKLALSNVAFNLVGLFMNDQVV
KKKAGKYEKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDEALELGLKESRKL
FAKQVERKKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEAVVENPKVKGAVLAEVEESVG
EGTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMPLVEVIRGAKTSDAAVGATVA
YARAMGKTPIVVNDCPGFLVNRILFPYFGGFSFLVEQGADFQRVDKVMEKFGWPMGPAYL
LDVVGLDTAVHAGEVMAEGFPDRMGSMSGEGDKKSAIQLMYENDRLGQKNDKGFYAYEED
RKGKPKKVSDEAAYALVKQVVKEEKEFSDDDIIARMMVPLCLETVRCLEDDIVASPAEAD
MALIYGIGFPPFRGGALRYIDALGVAEFVKLADRLAQELGPLYAPTEKLRKMADAGKRFY
PTASQG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggcaagaaacggcgacgatatcgccactctc
accttcgatttgaagggtgagtccgtcaacaagctttccagcgctgtcgttcaggagctg
ggtgacgcggtgaaggcgctggaaaacgagaatggcctgaaagggctgatgatcaccagt
ggcaaggatgctttcattgtcggtgccgatattaccgagtttcatggtctgttcgacaag
ggagaagagtacctggtcgaaatgaacctgaaggttcacgacatcttcaatgccattgaa
gatcttccgtttcccacggtgaccgccatcaatggcctggcgctgggtggtggctgcgaa
gtcctgctgaccaccgacttccgggtcatgggcgaaaaggccaagatcgggttgccggaa
acgaaactgggcattctgccgggctggggcggttgcgtccgcctgccgcgcttgatcggg
gccgacaacgccgtcgagtggatcgccggcggcacggaaaaccgggcagccgacgcattg
aagatgggcgcggtggatgccgtggtgcccaacgaccagcttgaagccgccgcgctggat
attctggcccgtgccgctagcggcgagctggattaccaggcccgccgcgacgaaaagaaa
cagcctctcaagctcaacgccatcgaacagatgatggccttcgagaccgccaagggctac
gtggcaggcaaggccggcccgcactacccggccccggtcgaagccatcaaggtgatccag
aaaggcgccggggaagagcgtgcccgcgcccaggcgatcgaggccaaggcattcgccaag
ctggccctgagcaatgttgccttcaacctcgtcggcctgttcatgaacgaccaggtggtc
aagaagaaggccggcaagtacgagaagcaggcgcagccggtcaagcagaccgcggtgctg
ggcgccgggatcatgggtggcggtatcgcctaccagagcgcctccaagggcacgccgatc
ctgatgaaggatatcaaggacgaagcgcttgagctgggcctgaaggagtcccgcaagctg
ttcgccaagcaggtcgagcgcaagaagctcaccaccgagcagatggcggaaaaactgacc
aatattcgccccacgctctcctatggtgatttcggcaatgtcgacctggtggtggaagcc
gtcgtcgagaatcccaaggtcaagggagcggtgctggctgaagtggaagaaagcgtgggt
gaaggcaccatccttacctcgaatacttcgaccatttcgatcaatcggttggcgcagaac
ctgaaacgccccgagaatttctgcggcatgcacttcttcaatccggtccatcgcatgccg
ttggtcgaggtgatccgtggcgcgaagacctccgatgccgccgtaggcgctaccgtggcc
tatgcccgcgccatgggcaagacaccgatcgtggtcaacgactgccccggatttctggtc
aaccgtattctcttcccctacttcggcgggttcagcttcctggtggagcaaggtgccgat
ttccagcgtgtcgacaaggtgatggagaaattcggctggccgatggggcccgcctacctg
ctcgatgtggtcggcctggatactgccgttcatgccggtgaagtgatggccgaaggtttc
cctgatcgcatgggcagcatgagcggcgagggtgacaagaagagcgccatccagctgatg
tacgaaaacgatcgtctggggcagaagaacgacaagggcttctacgcctatgaagaggac
cgcaagggcaagccgaagaaagtcagtgatgaggcggcgtatgctctagtcaagcaggtg
gtgaaggaggagaaggaattctccgacgacgacatcatcgcccgcatgatggtgccgctg
tgcctggaaaccgtgcgttgtcttgaagacgacatcgtcgcttccccggcggaagcggac
atggccctgatctacggcattggttttccgccgttccgtggtggcgcactacgctatatc
gatgcgttgggtgtagcggaattcgtcaagctggcggatagactagcgcaagaactcggt
ccgttgtatgcgccgaccgagaaactgcgcaagatggccgacgccggcaaacgtttctac
cccaccgccagccaaggctga
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