Halomonas kashgarensis: R5M92_06480
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Entry
R5M92_06480 CDS
T11163
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hka Halomonas kashgarensis
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hka03016
]
R5M92_06480
Enzymes [BR:
hka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
R5M92_06480
Transfer RNA biogenesis [BR:
hka03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
R5M92_06480
Prokaryotic type
R5M92_06480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
REase-ARP
Motif
Other DBs
NCBI-ProteinID:
XAW60914
LinkDB
All DBs
Position
complement(1408833..1409795)
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AA seq
320 aa
AA seq
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MKLIFLGTSAGVPTKQRNVSGVALRESKGKGWYLIDCGEGTQHQVLHTKLSFHSLKAIFI
THVHGDHCYGLPGLLASAGMGGRTAPLTIVAPAGIKAWLDATFDATQLCLPFALEFIASD
NLPSLEFENMAVATFGLSHRAPSYAYGFTETKMDAALDVDKLAQKGIPRGPLWGQLKQGF
DVEFGGERLKSHEFLIFKHKPRKVVIAGDNDRPDLLYEACAGAQVLVHEATYTEAMAEKA
GDVGHSYAKLVAAFTESVALPNLVLTHFSPRYQLSPHASPSIEDIRKEAQSVYSGSLYLA
RDFSEYSLDKTGRFYEVAGE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatattcctcggcacctccgccggtgtccccaccaagcagagaaacgtctct
ggggttgcgttgcgagagagcaaggggaagggctggtacctgatcgattgcggggagggc
acccagcatcaggtcttgcacacgaagctgtcattccattctctgaaagccatctttatt
acccacgtacacggcgaccactgctatgggctgccgggcctactggcgagtgcgggaatg
ggtggccggacagcaccgctgaccattgtcgcgcccgcaggcatcaaggcatggctggac
gctacttttgatgctacacagctttgcttgcccttcgccctggaatttatcgcctcggat
aacctgcccagcctcgagtttgagaacatggcggtggccacgttcggactttcacacagg
gcgccgtcctatgcttatgggtttacggagacaaagatggatgctgccttggacgtggat
aagctagcgcagaaggggattcccagagggccgttgtgggggcagttgaagcaaggcttt
gatgttgagtttgggggcgagcggttaaaaagccatgagttcttgatcttcaaacacaag
ccgagaaaagtcgtgattgccggggacaacgaccggcccgacttgttgtatgaggcgtgc
gcgggggcgcaggtgctggtacatgaagccacctacaccgaagcaatggccgagaaggcc
ggtgacgtggggcatagctacgccaagctggtcgctgcatttaccgaatcggtagcgctc
cccaacctggtgctgacgcactttagcccccgttaccagctaagccctcatgcgtcgcca
tccattgaggacatccgcaaggaagcccaaagcgtctattcgggttcgctttatctagcg
cgggattttagcgaatacagcctggataaaacgggccgcttctatgaagtggcaggcgaa
tag
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