Halomonas kashgarensis: R5M92_06685
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Entry
R5M92_06685 CDS
T11163
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hka Halomonas kashgarensis
Pathway
hka02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R5M92_06685 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hka02000
]
R5M92_06685 (msbA)
Enzymes [BR:
hka01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
R5M92_06685 (msbA)
Transporters [BR:
hka02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
R5M92_06685 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
RestrictionSfiI
RsgA_GTPase
nSTAND1
DUF87
MMR_HSR1
NB-ARC
AAA_23
Motif
Other DBs
NCBI-ProteinID:
XAW60953
LinkDB
All DBs
Position
complement(1451432..1453180)
Genome browser
AA seq
582 aa
AA seq
DB search
MTHESGWTLYKRLLGYVKPHWRAFALATLGYVIYAASSTALAEMMKRLIDGIQNPDAGFR
LFLPLFVVIMFAARGLGTFLGTYFMTSVARHVIHALRCNVFNHLLHLPGEFFDHHSSGHL
VSRVTYHVEQVAGAATKAITILLREGLFVIGLLAYLLWTNWLLTLLFLAVTPLIAGVVSY
ASKRFRRISRRIQHTMGDVTHVASEALSGYRVVRTHGAEEYEKQRFARVSEENRRQSMKE
AVTKATSTPVIQLLVALSLALLVWVAMAPSLIAEMTPGEFVAFITAAALMAKPVRQLTEI
NSEIQKGIAAAGELFGLLEVPAERDDGDHEVSRLRGKIVLSELGFRYAEEQPEVLQGINL
EVEPGEMVAIVGRSGSGKSTLVSLLPRFYHPSHGKIYLDDVPLERYRLGPLRRQIALVSQ
QVTLFNATVAENIAYGASNPDPAAIEAAARAAYAHEFIEQLPQGYATPVGENGVMLSGGQ
RQRLAIARAIFKDAPVLILDEATSALDTESERYIQKALEAVCQGRTTLVIAHRLSTIERA
DRIVVMDQGRLVEQGTHAQLLARDGAYAALHKLQFQDAHEPE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttgactcacgaatctggttggacgctctacaaacgcctgctgggctacgtcaaaccccac
tggcgggcttttgccttggcgacactgggctatgtcatctatgcggcttcgagcacggcg
ttggcggaaatgatgaagcgcctgatcgatggcatacagaaccccgatgctggttttcgc
ctgtttttgcccctgttcgtcgtcatcatgttcgccgcccgtggcctgggcacttttctc
ggcacttatttcatgacatcggtggcgcgtcacgtcatccatgcgctgcgctgtaatgta
ttcaatcatttactgcacttaccgggtgagttcttcgatcaccactcaagtgggcatctg
gtttcccgggtgacctaccacgtggaacaggtagccggcgcggcgaccaaggccattacc
atactgctgcgcgaagggttgtttgtcattggactactggcctatctgctgtggaccaac
tggctgctgacactgctgtttctcgccgtcacgccgttgatcgccggagtggtcagctat
gccagcaagcgtttccggcgcatatcccggcgcatccagcacaccatgggggacgtgacc
catgtggcttccgaggccttgtcgggctatcgggtggtgcgaacccacggggccgaagag
tacgagaagcagcgctttgccagggtcagcgaggagaatcgccggcagagcatgaaagag
gcggttaccaaggccaccagtacaccggtgatccagctgctggtggcgctttccctggcc
ctgctggtttgggtggcgatggcgccgagcctgattgccgaaatgacgccgggggaattc
gtggcctttattactgcggcggcgttgatggccaagcccgttcgccaattgaccgaaata
aacagcgaaatccagaaaggtatcgccgcggcgggggagcttttcggtctgctcgaagtg
ccggcggagcgcgatgacggcgatcatgaagtgtcgcgcctgcgtggcaagatcgtcttg
agcgagctgggctttcgctacgccgaggaacaaccggaagtcctgcagggaatcaatctg
gaggtcgagccgggcgagatggtggcgattgtcggtcgttccggcagtggcaagtcgacc
ctggtcagcttgttgccgcgcttctatcatcccagccacggaaagatctatctcgatgac
gtgccgctggagcgctaccgtctgggccccttgcgccgtcagatcgccctggtttctcaa
caggtcacgctgttcaacgccacggtagcggagaatatcgcttacggcgcatccaatccc
gacccggcggcaatcgaggccgcggcgcgtgcggcctatgctcatgaattcatcgaacag
ctgcctcaaggctacgccactccggtgggagagaacggcgtcatgctctcgggcggccag
cgccagcgcctggcgatcgcccgtgccatcttcaaggacgcccccgttctgattctggat
gaggccacctccgcactcgataccgaatccgagcgctatatccagaaggcgctcgaggcg
gtgtgccaggggcgcaccaccttggtcatcgcgcaccgactttcgaccatcgaacgcgcc
gatcgaatcgtggtgatggaccagggacggctcgttgagcagggtacccacgcgcaattg
ctggctcgagacggcgcctatgcggcgctgcataaactgcagtttcaggacgcccatgag
cccgagtga
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