Halomonas kashgarensis: R5M92_08310
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Entry
R5M92_08310 CDS
T11163
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hka Halomonas kashgarensis
Pathway
hka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R5M92_08310 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hka03400
]
R5M92_08310 (recC)
Enzymes [BR:
hka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R5M92_08310 (recC)
DNA repair and recombination proteins [BR:
hka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R5M92_08310 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
LXG
Motif
Other DBs
NCBI-ProteinID:
XAW58312
LinkDB
All DBs
Position
1803824..1807477
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AA seq
1217 aa
AA seq
DB search
MSANSLLSPSPLTPGFMVVHANRLEDLRGLAVEWMRSQPLGPLENETILVQSNGIGQWLK
LALAQDPANGGAGIAAALNVTLPARFLWQAYRTVLTHVTSDPEAVPETSPFDKSRLVWRL
LRLLPTLAGQDVFAPLAQFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWARGEDV
LITARGDTRPLEAHQRWQPELWRILRDDVAATQGEAGLNSSRAQVHRRFLSAAEWLEGQA
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDLLRAKR
YRQRRKTGMPEALDVLGTGDAIEALHLHAQPLLAAWGKQGRDYLRLLDEHDDTGDYQTLF
EQQALRIDMFEPFNGPKRNCLLSQLQDDIRELRPVAETRNHWPALPESDDSIVFHIAHGP
QREVEILHDQLLAAFSADPQLRPRDIIVMVPDIDRYAPHIEAVFGQLASDDPRHIPYTLS
DQASRHRLPLMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLAERDLPVLERWMEGA
GIRWGLNAKQRQKLELPGGLAQNTWAFGLRRLLLGYTVGGGHAWQGIEPFDDIGGLEAGL
AGPLATLLEKLEATWETFCQPTDAVGWVARLRELLETFFLTDDAQESVMLTKLENGLQQI
LESSREAQLSEPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKRVCLLG
MNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWVGRSQIDN
TALAPSVLVGQLRDHLEAGWQLETGAPLLDALTTEHPLQPFSRAYFSDAPNSVRLFTFAH
EWRGAHEWREIRAPRTPAKATSSLAPLENAPTGLSLGQLGSFLREPVRAFFNTRLGVYFE
REAIAELDAEPFALDGLQNWQLQDQLIAAQRHAVDNGQSRIEALHAQLERFQGQGVLAIG
AFGERMRTALAEPMEALFSAYEDALAQWPTAISAPQAVHLESDGLVLEDWLDEIRRNERG
ERCRLLLLSSSLISQGSGRGQYRWQHLLRPWVAHLAGNLSGPMTTRLISKAGDITLEPVA
ADTAHAHLKTQLSAWRHGLEAPLPLAPLAAFAWLTKLGTPEIATEKGRESDAYAAAEATY
EGGRYQTGEVAQSAYLSHQWPRFERLFNDRARCFEEQHHSFATLTEALYAPLFNAVKNPA
GKDQQQREDSKNTGAAQ
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaactcactgctctcgccgtcaccgctgacacccggctttatggtggtacac
gccaatcgcctggaagacttgcgcgggctggcggtggagtggatgcgcagccagccgctg
gggccgctggaaaacgaaaccatcctggtgcagagcaatggcatcggacagtggctgaaa
ctggcgttggcgcaagacccggcgaacggcggtgcagggattgccgccgcgctgaacgtg
acgctgcccgcgcggtttttgtggcaggcctaccgcacggtgctgacccacgtcaccagc
gatcccgaagccgtccccgagacctctcccttcgataaatcacgcctggtgtggcggctg
ctgcgcttgctgcccacgctggcgggacaggacgtattcgccccgctggcgcagtttctg
gaagtcgaccgcgaccagcgcaagcattatcaattggcggaacgactggcggacctgttc
gaccagtaccaggtgtaccgcgccgactggctggacgcctgggcacgaggggaagacgta
ctgatcaccgcccgaggcgacacccgcccgctggaagcgcatcagcgctggcagccggaa
ctgtggcgcatcctgcgcgacgacgtcgccgccacccagggcgaggcgggcctgaacagc
agccgcgcccaggtccaccgccgtttcctgagcgccgccgaatggctcgaaggccaggcc
tgcccgccggggctgccccggcggttgatcattttcggcatttcgtctctgccccagcag
acgctggaagcactcgcggcgctgtcgcgctgctgccagatcgtgctctgcgttcacaac
ccttgccagttctactgggcggatatcatcgaacacaaggacctgctgcgcgccaagcgt
taccgccagcgccgcaagaccggcatgcccgaagcgctggacgtactcggcaccggcgac
gccattgaggccctgcacctgcacgcccagccgctgctggccgcctggggcaagcagggc
cgcgactacctgcgcctgctcgatgaacacgacgacaccggcgactaccagaccctgttc
gagcagcaggcgctgcgcatcgacatgttcgagccgttcaacggccccaaacgcaactgc
ctgctcagccagctgcaggacgacatccgcgagctgcgcccggtggcggaaacccggaac
cactggcccgcgctacccgaatcagatgactccatcgtgttccatatcgcccacgggccc
cagcgggaagtggagattctccatgaccagctgctcgccgccttcagcgccgacccacag
ctgcgtccgcgcgatatcatcgtgatggtgccggatatcgaccgctacgcgccgcacatc
gaagcggtgttcggccagctggcaagcgacgacccgcgccatattccctacacgctttcc
gaccaggctagccgtcaccgcctgccactgatgattgccctggaaaagctgctgcgcctg
ccggagctgcgcctttccgtcagcgacctgctcgacctgctcgatgtccccgccctgcgc
cagcgcttcgggcttgccgagcgcgacctgccggtgctggagcgctggatggagggcgcg
ggtatccgctgggggctgaacgccaaacagcgccaaaagctggagttgcccggcgggctt
gcacaaaatacctgggcgtttggcctgcgccggctgttgctgggctacaccgtgggcggc
ggccacgcctggcaaggcatcgaaccgttcgacgatatcggcgggctggaagcgggcctg
gccggaccgctcgccacactgctggaaaagctcgaagccacctgggaaaccttctgccag
cccaccgacgccgtcggctgggtggcgcggctgcgcgagcttctggaaactttctttctc
accgacgacgcccaggaaagcgtcatgctcaccaagctggaaaacggcctgcaacagata
ctggaaagcagccgcgaagctcagctttccgagccgttgccgctctccatggtgcgcgag
cactggctggcgcagattgacgagcacagcctttcccagcgctttctggccggggcggtc
aacttcgccaccttgatgcccatgcgcgccattccgttcaagcgcgtgtgcctgctgggc
atgaacgacggcgaatacccccgctcccagccgccgctggatttcgacctgatgggcagc
gactaccgccccggcgaccgctcccgccgggaggacgaccgctacctgttcctggaagcg
ctgctctccgcccgcgaccagctctatatcagctgggtgggacgcagccagatcgacaat
actgcgcttgcgccctcggtgctggtgggccaactgcgcgaccacctggaagccggctgg
caattggaaaccggcgcaccgctgctggacgccctcaccaccgagcacccgctgcagccc
ttcagccgcgcttacttcagcgatgcgccaaacagcgtgcgactgttcacctttgctcat
gaatggcgtggggcccacgaatggcgcgagatccgtgctccacgcacgcccgccaaagcc
accagctcgcttgccccgctggaaaacgcccccaccggcctctcgcttgggcaactgggc
agttttctgcgcgagccggtacgcgccttcttcaatacccggctgggggtgtatttcgag
cgggaagccatcgccgagctggacgccgaacccttcgccctggacggcctgcaaaactgg
caattgcaggaccagctgattgccgcccagcgccacgcggtggataacggccaatcgcgc
atcgaggcgctccacgcgcaactcgaacgctttcagggccagggcgtactggcgataggc
gcctttggcgagcgcatgcgcacagccctggcggagcccatggaagccctgttcagcgcc
tacgaagatgcgctggcccagtggcccacggccatcagcgccccgcaggcggttcacctg
gaaagcgacggcctggtgctggaagactggctagacgaaatccgccggaacgaacgcggc
gagcgctgccgcctgttgctgctcagcagcagcctgatcagccagggcagcgggcgcggc
cagtaccgctggcaacacctgctgcgcccctgggtggcgcatctggcgggcaatctgagc
ggcccgatgaccacgcggctgatctccaaggcaggcgacatcacgctggaaccagtcgcc
gccgataccgcccatgctcatctaaaaacccagctgagcgcctggcggcacggccttgaa
gctccccttccgctggccccgctggccgccttcgcctggctgaccaaactcggcacaccg
gaaatcgccacggaaaaaggccgggaaagcgacgcctacgccgccgccgaagccacctat
gaaggcgggcgctaccagaccggcgaagtggcgcaaagcgcctatctgagccatcaatgg
ccacgcttcgagcggctgttcaatgaccgcgcccggtgtttcgaagaacagcaccacagc
ttcgccacgctgaccgaagcgctctacgccccgctgttcaacgcggtcaagaatcccgct
ggcaaggatcagcagcagcgtgaagacagcaagaacacaggagccgcccaatga
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