Halomonas kashgarensis: R5M92_10135
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Entry
R5M92_10135 CDS
T11163
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hka Halomonas kashgarensis
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hka03021
]
R5M92_10135 (rpoH)
Transcription machinery [BR:
hka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R5M92_10135 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UPF0231
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
XAW58651
LinkDB
All DBs
Position
complement(2207480..2208346)
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AA seq
288 aa
AA seq
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MSNSLLPVGQLSPGHDLGGYIQAVNGIPVLTAQEERELAYRLYDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLAWLNNDEVDAIAKDLDVKPEVVRDMEGRLSAYD
AGFDASPGEDEDSVYQAPVHYLDDAASDPAAQLEDSDFEADSTRRLQGALELLDDRSRDI
LQRRWLAEEKATLHDLADVYGVSAERIRQLEKNAMKKIRQKMGDTLAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtcttctaccggtgggacagctttctccggggcacgacctgggcggctat
attcaagccgtcaacggcatccccgtgcttaccgcccaggaggagcgtgagctggcgtat
cgcttgtatgacgagggtgatcttgaagcggcacgtcgcctggtgctgtcgcacctgcgg
ttcgtggtgcacatcgcacgcagttattccggttatggcttgccccaggcggatttgatc
caggaaggcaacgtcggtttgatgaaagccgtcaagcgcttcgaccccaaccagggcgtg
cgcctggtatcgttcgcagtgcactggatcaaggcggaaatccacgaattcgtgctgcgc
aactggcgcatcgtcaagattgccaccaccaaggcgcagcgcaagctgttcttcaatctg
cgcagcgccaagaagcgcctggcctggttgaacaacgacgaagtcgatgccatcgccaag
gacctcgatgtcaagcccgaggtcgtgcgcgacatggaagggcgtctttccgcctacgac
gcaggcttcgatgcctcgccgggcgaagacgaggacagcgtctaccaggcaccggtacat
tatctcgacgacgccgcctccgacccggccgcgcagctggaggacagcgatttcgaagcg
gattccacgcgccgcttgcaaggcgccctggagctgctggatgatcgctctcgagacatc
ctccagcgtcgctggctggccgaggaaaaggccaccctgcacgatctggctgatgtctat
ggtgtcagcgccgagcgtatccgacagctggaaaagaacgccatgaaaaagatccgtcag
aaaatgggagatacgctggcggcctga
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