Halomonas kashgarensis: R5M92_10300
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Entry
R5M92_10300 CDS
T11163
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
hka Halomonas kashgarensis
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hka03000
]
R5M92_10300
Transcription factors [BR:
hka03000
]
Prokaryotic type
Helix-turn-helix
LysR family
R5M92_10300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
HTH_5
PBP_like
HTH_20
MarR_2
HTH_24
HTH_Tnp_ISL3
HTH_23
I-HmuI_NUMOD-like
HTH_50
Motif
Other DBs
NCBI-ProteinID:
XAW58680
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All DBs
Position
2242320..2243261
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AA seq
313 aa
AA seq
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MNIRHLTFRLLQVYVAVVRYGSVSEAARQLHLTQPTVSQQLKRLTETVGSPLLEHRAQGL
TMTATGQALYQASRDVLGRFDDFTDQLSDLQQGNKGRFNIALVNTAQYVLPRLLGPFSQA
FPDVDVTLHIGNRRQVLARFERGEDDLYVFSHPPALAHAVAARFMHNPLVAIAAADHPLG
RQSSIAMEQLLEERLLLREPGSATRMLLESWLQEHGLTMKKTLQMASNEAIRVGVAAQMG
VAVLSEHVLPREHPELTILPIEDFPIESQWQFIVRNDQRLPQSAQHFLGYVHDHLAQWIE
PRFVCNELGTLLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacgtcacttaacgttcaggctgcttcaggtgtatgtcgccgtggtacgttac
ggctcggtcagcgaggcggcacggcagctgcaccttacccagccgacggtatcgcagcag
ctcaaacggctgacggaaacagtgggcagcccgctgttggagcatcgtgcccaggggttg
accatgaccgcgaccgggcaggccctttaccaggccagtcgcgacgtcctggggcgcttt
gatgacttcaccgaccagctgagcgacctgcagcaaggcaacaagggccgcttcaacatt
gcgctggtcaacaccgcccagtacgtgttaccacgcttgctggggcctttcagccaggcg
tttcccgacgtcgacgtgaccctgcatatcggcaaccgccgccaggtactggctcgtttc
gagcgcggggaagatgatctctatgtcttcagccatccccccgcactcgcccacgccgtg
gcggcacgcttcatgcacaatcccctggtggcgattgccgccgccgaccatcccctggga
cgacaatcctccattgccatggagcaactgcttgaagaacgtctcctgctgcgcgaaccg
ggctctgccacgcgcatgctgctggaaagctggcttcaggagcatgggctgaccatgaaa
aagacgctgcagatggccagcaacgaagccattcgtgtaggggtagccgcgcaaatggga
gtggcggttttatcggagcacgtgctgcccagggagcacccggaattgacgatcctgccg
atcgaggattttccgatcgaaagccaatggcaattcatcgtgcgcaatgaccagcgcctg
ccgcagtccgcccagcattttctcggctatgtccatgaccatctcgcccagtggatcgag
ccccgcttcgtctgtaacgaactcggcacgctgcttgattga
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