Halomonas kashgarensis: R5M92_12360
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Entry
R5M92_12360 CDS
T11163
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
hka Halomonas kashgarensis
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hka03400
]
R5M92_12360
DNA repair and recombination proteins [BR:
hka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
R5M92_12360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
AAA_16
AAA_30
DUF7577
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
XAW59060
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Position
complement(2679968..2681770)
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AA seq
600 aa
AA seq
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MSRSSSPATDITSGSPPSLRPYQTEAVTRVVEHFRATSDPAVVVLPTGSGKSLVIAELAR
LARGRVLVLAHVRELVEQNHAKYQAYGLEADIFSAGLKRKESGRQVVFGSVQSVVRNLDN
FSDAGFSLLVIDECHRVSLAKDASYRRVIEHLRKHNPQLKILGLTATPYRLGQGFIYHRH
THGMVRGDEDCFFRDCVFEQPLRLMVKQGYLARPERIDAAVERYDFSRLTPATTGLFREE
ELNRVVAGNRATPGIIGEIIQRSENRQGVMIFAASVAHAEEIMGYLPAGVAALVTGATPS
AERERLIAGFKAREIKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSS
GKTDCLILDYAGNPWDLYAPEVGSPKPPGDNEPVQVECPACGHANLFWGKRDGDIVIEHF
GRRCQGLVAASGDCKKYQCDFRFRFKVCGDCGTENDIAARRCHGCQVLLVDADDKLKDAL
KLKDAKVLRVSGMQLESTTNGRGLPRLKITYHDEDGATLVEWFALETAAQRRAFYGVFLR
DHLRAPGLSWQPATPEAVIAERQRLRQPDFVIGRKVGRHFQLREKLFDYSGRYRKAHGAE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatccagttctcctgccaccgatattacctccggctcgccgccgagtttgcgc
ccttaccagactgaagctgtgacgcgtgtggtcgaacattttcgtgccaccagcgacccc
gcggtggtggtgttgcccaccggcagcggtaagtccctggtgatcgccgagctggcgcgc
ctggcccgcggtcgggtactggtgctggctcacgtacgtgagctggtcgagcagaaccac
gccaagtatcaagcctacgggcttgaagcggatatcttcagcgccgggctcaagcgcaag
gagagcgggcgccaggtggtgttcggctcagtgcagtcggtagtgcgcaatctggataat
ttcagcgatgccgggttcagcctgctggtcatcgacgagtgccaccgcgtctcgctcgcc
aaggacgcgagctatcgccgggtaatcgagcatctgcgcaagcacaatccgcagctcaag
atactcggcctcaccgccactccctaccgcctggggcaagggttcatctatcaccgccat
acccacggcatggtgcgcggagatgaagactgcttctttcgtgattgcgtcttcgagcaa
ccgctgcggctgatggtcaagcagggctatctggcaaggcccgagcgcatcgatgccgcc
gtggagcgttacgacttctcgcggttgacgcccgccacgacggggctgtttcgcgaggag
gagctcaatcgggtggtcgcgggcaatcgcgccacgccgggtatcatcggcgagatcatc
caacgtagcgaaaaccgccagggcgtgatgatcttcgccgcctcggtagcccatgccgag
gagatcatggggtatcttcctgccggcgtggcggcgctggttaccggcgccacgccgtca
gcggagcgcgaacggttgatcgccggcttcaaggcccgcgaaatcaagtatctggtcaat
gtggcggtgctgaccaccggcttcgacgcgccccatgtcgacttgatcgcgattttgcgg
cccaccgaatcggtcagcctctatcagcagatcgtcgggcggggtctacgtctttcatcg
ggcaagaccgactgcctgattctggattacgccggcaacccctgggatctctacgccccg
gaggtcggctcgcccaagccgcccggcgacaatgagccggtacaggtggagtgtccggca
tgcgggcatgccaatctcttctggggcaagcgcgacggcgatatcgtcatcgagcacttc
ggccgccgctgccaagggcttgtggcggcctctggcgactgtaaaaagtaccagtgcgat
tttcgctttcgcttcaaggtctgtggcgattgcgggacggaaaacgatatcgcggcaagg
cgctgccatggctgccaggtgctgctggtggatgccgacgacaagctcaaggacgccctg
aaactcaaggacgccaaggtattgcgcgtcagcggcatgcagcttgaatccaccaccaac
gggcgcggtctcccgcgcttgaagatcacctatcacgacgaggacggtgcgacgctggtg
gagtggttcgccctcgaaaccgccgcccagcgacgtgccttttacggcgtcttcctgcgt
gatcaccttcgcgctcccggcttgtcctggcagcccgccacgcccgaggcggtgatcgcc
gagcggcagcgcctgcgccaacccgatttcgtcatcggacgcaaggtggggcggcacttc
cagctgcgcgagaagctgttcgactatagcggccgctatcgcaaggcccacggggcggag
tga
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