KEGG   Halomonas kashgarensis: R5M92_13070
Entry
R5M92_13070       CDS       T11163                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
hka  Halomonas kashgarensis
Pathway
hka02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hka00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    R5M92_13070
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hka02022]
    R5M92_13070
Two-component system [BR:hka02022]
 NtrC family
  HydH-HydG (metal tolerance)
   R5M92_13070
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 AAA_16 AAA Mg_chelatase IstB_IS21 HTH_AsnC-type AAA_22 HTH_8 HTH_24 HTH_11 DUF603 Sigma70_r4_2 ATPase DUF815
Other DBs
NCBI-ProteinID: XAW59189
LinkDB
Position
2851963..2853333
AA seq 456 aa
MRRILIVEDEAIIRSALRRLLERQSYAVSEAGSAEEARALALDEFDLIISDLRLSGDPGT
ALIAAAAPIPVLIMTSYASMRSAVDALKLGAVDYVAKPFDHDELLETVARILHQRASLES
VPPAVTVEGGCRQPMIGDCTAMQQVYTRISKTAPADVTVLIQGESGTGKELVARALHQQS
KRAGAPLICVNCAAIPETLIESELFGHEKGAFTGASAARTGLVEAADGGTLFLDEIGELP
LDAQARLLRVLQEGEIRKIGSVETRHVDVRLIAATHRDLRALSKSGEFRLDLYYRLNVMQ
IDLPPLREREDDVLKIADILLEKACKRHGREGLRLSRAARQDLHDYPWPGNVRELENALE
RGVILAEGHLIHSDDLGLAPSPPRPTPAPATPGASEDSDADGDLSLEDYFQHFVLEHQDQ
MSETELAQKLGISRKNLWERRQRLGIPRKKTTRRPS
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgcgccgaatactgattgttgaagatgaagccatcattcgtagcgccctgcgtcgcctg
ctggagcgccaatcctatgcggtcagcgaggccggcagcgcggaagaggcccgggcgctg
gcgctcgatgaattcgacctgatcatcagcgacctgcgactttccggcgatccgggtacg
gcactgatcgcggcggcggcaccgatcccggtgctgatcatgaccagctacgccagcatg
cgctcggcggtggacgccctgaagctcggggcggtggactacgtcgccaagcccttcgac
cacgatgagctgctggaaacggtggcgcgcattctgcatcaacgcgccagcctggaaagc
gtgccaccggccgttaccgtcgagggcggctgccgccaaccgatgatcggcgactgtacc
gccatgcagcaggtctatacgcgaatcagcaagaccgctcccgccgatgtcacggtactg
atccagggcgagtcggggactggcaaggagctggtcgcccgagcactgcaccagcaaagc
aagcgtgctggcgctccgcttatctgcgtcaattgtgcggcgataccggaaacgctgatc
gagtccgagctattcggtcacgaaaaaggtgccttcaccggtgccagcgccgcccgtacc
ggcctggtcgaagccgccgacgggggcaccctgttcctcgacgaaatcggcgaattgccg
ctggatgcccaggcacgcctgttgcgggtgcttcaggaaggcgagatccgcaagatcggc
tcggtggaaacccgccatgtcgacgtgcgcctcattgccgctacccaccgcgaccttcgc
gcgctatccaaaagcggcgaattccgcctcgacctctactatcgcctgaatgtgatgcag
atagatctgcccccgctgcgcgagcgcgaagacgacgtgctgaagatcgccgatattctg
ctcgaaaaagcctgcaagcggcatggccgtgaaggtttgcgcctgtcacgcgccgctcga
caggatcttcacgattatccgtggccgggtaatgtgcgggagctggagaatgccctggaa
cggggcgtgatccttgccgaagggcatctgatccattccgacgatctgggccttgcgccc
tcgccgccccggcccactcctgcaccggcgacacccggcgccagcgaagatagcgatgcc
gatggcgatctctccctggaggattacttccagcacttcgttctcgagcatcaggaccag
atgagtgaaaccgaactggcccagaagctcggcatcagccgcaagaacctctgggagcgc
cgtcagcgcttgggaatcccgcgcaagaaaacgacgcgccgaccctcttga

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