Halomonas kashgarensis: R5M92_13135
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Entry
R5M92_13135 CDS
T11163
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
hka Halomonas kashgarensis
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hka03021
]
R5M92_13135 (nusA)
03009 Ribosome biogenesis [BR:
hka03009
]
R5M92_13135 (nusA)
Transcription machinery [BR:
hka03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
R5M92_13135 (nusA)
Ribosome biogenesis [BR:
hka03009
]
Prokaryotic type
rRNA transcription factors
R5M92_13135 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF4332
KH_NusA_C
S1_RRP5
Glyoxalase_4
RNA_pol_Rbc25
MRP-S35
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
XAW59202
LinkDB
All DBs
Position
complement(2868021..2869535)
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AA seq
504 aa
AA seq
DB search
MSKEILMVVDAISNEKGVPRDVIFAAVEAALASASRKRFENEEANVRVHIDRRTGDYDTF
RYWTVVEDDEFETPDYEIKESIAEQRDPPLKLGDVVEKKIENAAFGRIAAQTAKQVIVQK
VREAERAEVVRQYADREGELVAGIVKKTTRDGLIIDLGDNAEAFLPRQEMIHGERYRMNE
RVRALLVKVDPEARGAQLLLSRTCPELIIELFKIEVPEIAEQLIEIKGAARDPGSRAKIA
VKTNDRRIDPVGACVGMRGSRVQAVSTELQNERVDIVLWDDNPAQLVINAMAPADVGSIL
VDEDAHAMDVAVAEDNLAQAIGRSGQNVRLASELTGWRINVMTESEAEDKREQEIDSLVD
AFIQQLDIEDDIARLLVEEGFTTLEEVAYVPLEEMLEIEEFDEDLVEELRSRAKDELLTM
AIASEEALDGAQPAEDLLEMDGMERHLAFILASRGIVTMEDLAEQSVDDLVDIEELDEAR
AAALIMTARAPWFEDDAASESNTQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaatattaatggtcgttgacgcgatctccaatgaaaaaggcgtcccgcga
gatgtcatttttgcagctgtcgaggcggcgttggctagcgcgtcacgcaagcggttcgaa
aatgaagaagccaatgtacgcgttcatatcgaccgccgtaccggcgactacgataccttc
cgctactggacggtggtggaggatgacgaattcgaaactcccgattacgaaatcaaggag
tccatcgccgagcagcgcgatccgccgctgaagctcggtgatgtggtcgagaaaaagata
gaaaacgccgctttcggacgtattgccgcccagaccgccaaacaggtcatcgtgcagaaa
gtgcgcgaggccgagcgggccgaagtggttcgccaatacgccgatcgcgaaggcgagctg
gtcgcaggcatcgtcaagaagaccacccgcgatggcttgatcatcgacctgggtgataac
gccgaagctttcttgccgcgtcaggaaatgatccatggcgaacgctaccgcatgaacgag
cgggtgcgggcgctgctggtcaaggtcgacccggaagcgcgcggcgcccaattgctgctg
tcgcggacttgcccggagctgatcatcgagctgttcaagatcgaggttccggaaattgcc
gaacaactgatcgaaatcaagggcgcggcacgggatcccggttcgcgcgccaagatcgcg
gtcaagaccaacgatcggcgtatcgaccccgtaggggcgtgtgtgggtatgcgcggctcc
cgggtacaggcggtttccacagagctgcagaacgagcgagtggatatcgtgctgtgggac
gacaatccggcccagttggtcatcaatgcgatggccccggcggatgtcggctccatcctg
gtggacgaggatgcccatgccatggacgtcgccgtcgccgaggacaacctggcccaggcg
atcggtcgcagtggtcagaacgtgcgcctggcctccgagctgaccgggtggcggatcaac
gtcatgaccgaaagcgaggcggaagacaagcgggagcaggaaatcgacagcctggtggac
gccttcatccagcaattggatatcgaagacgacatagctcgtctgctggtggaggaaggg
tttaccacgctggaagaagttgcctacgtaccattggaagagatgcttgaaatcgaggag
ttcgacgaagacttggttgaagagctacgttcacgggccaaggatgagttgctgacgatg
gcgattgcctctgaagaagcactcgacggcgcccaaccggcagaagatttactggaaatg
gacggcatggagcggcacctggcctttatcctggccagccgcggcattgtcaccatggaa
gatcttgccgaacagtctgtcgatgatctggtcgacatcgaggagttggacgaagcgcgc
gcagcggcactgatcatgactgcccgtgcgccctggttcgaggacgacgccgcgtcggaa
tcgaacacacagtaa
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