Halomonas kashgarensis: R5M92_13370
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Entry
R5M92_13370 CDS
T11163
Name
(GenBank) DUF4347 domain-containing protein
Organism
hka Halomonas kashgarensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
Big_12
Big_9
He_PIG
Cadherin_4
Cadherin
DUF4214
Cadherin_5
Big_5
HemolysinCabind
Cadherin_CELSR2_9th
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
XAW59240
LinkDB
All DBs
Position
complement(2918668..2924421)
Genome browser
AA seq
1917 aa
AA seq
DB search
MASDLLQRGSDGNVFFIDKGIADWRSLVDGVPQGAEIVTLDPSRDGLVQMAEWAEGKAGY
EAIHILSHGSQGQVQLGTASLNNDTLTDYSEALAKIGQSLTEDGDILLYGCDVAAGQSGV
EFIGKLAQATGADVAASNDLTGAETKGGDWVLEQQVGEIQTQTLVGMQYQHALAAPTDQD
FTDIPLHNFYPLPYKVGGAGGLSFAASPGSYAELYITNEPTGFTTGDAAYFSAHAGPTGI
DSSVYVEFSSVDPDGDGPEAKSLFTLGQLAAGYEEYSHLSSYVVSGRADGEEVVSVEVDL
ATTGNYGSGTSEITYTKSAQDIQGHGPYIGGTLSFGDAWTNIDTIRFTVFDPDMIHDPLM
MSVNLLLDTIDFSEPVQVDTTPPTVDVVVADTSLIPGETSTVTFTFNEAIQGFSNDDLTV
ANGTLSTVATADGGKTWTATLTPTANISDETNVITVTLDSVSDLAGNFGTGTANSNNYAI
NTIVLNTPTLALGIDSGASDSDGVTSNGQVNVSGLEQDATWEYSTDSGESWITGNGTSFT
LQYDGAKSVIARQSDIAGNASSISQALSFTLDTTISTPTLALAEDNGADANDGVTSNGQV
DVFGLEQGASWEYSTDDGQNWTAGESSSVTLQGDGTKSVIVRQTDVAGNASPASQTLDFT
LDSPPTLISASSTPADNAPDASISGSLQLKFSEAISFKNTEGSITLYDLTDAQNPVAVES
FDISDIGSGNGTISIDGDTLTINPAQDLLLSTAYAVQISSDLIQDAVGNTFAGIVDYTTY
KFTTIANTAPDIASNSGGETASINIVENSTAVTTVTATDADSDTLTYSITGGADQAKFNI
DTSTGVLSFKTAPNFENPTDSDTNNSYIVEVIADDSNGGTDVQTITVNVTDVNEAPTTTG
LSDQSSDDAEAISLDTATAFADVDTSDTLSYSATGLPNGLSMDPTTGVISGTLDTSASQS
GPYNVTVTANDSHGGSVDATFLWAVANPTPVVDDDTTSTDEDNALTVAADGVLSNDVDLD
GDTLRVTQVDGDANNVGESLAGDSGGLFTVKADGSYRFDPAGDFDSLAASESRASSVTYT
AEDGEGGTATATLTVTVAGVNDAPTTTGLSDQSSDDAEAISLDTATAFADVDISDTLSYS
ATGLPNGLSIDPMTGVISGILDTSASQSGPYNVTVTANDSHGGSVDATFLWAVANPTPVA
DADTTSTDEDNALTVAADGVLTNDVDPDGDTLRVAQVNGDASNVGAPLAGDSGGLFTVNA
DGSYRFDPAGAFDSLAANESRTSSVTYTAEDGEGGTATATLTVTVTGVNDAPVITSGATG
TVEENAATGTVIYTAAATDVDADQAPAYILSGTDADLLDIDTGSGEVTLKASADFEAKPS
YSFEVIVTDDGDSSLNATQAVTVNVIDVNDAPTGIVAVSGTVRQGETLTVSNTLADEDGL
GTISYQWLRDGVAIEGAIGEAYTLVRADIRAEISVQALYTDGQGTAETVTSLVTDPVVAL
PVSPPRPEPELEIDVTPLPDTPVGETAVRETFNNTGVASRSARLVENTGNNNVVTATLPG
GTQLTSDGARTATERDQALTSLVASIEGKAPSNLTDQTQTAANWLNTRPAGTQLDIRTLT
FTSDNATNDPIVIRGETDNSASGFQEAFVIDVTNLPGSTRLQLDNVDFASIKGAVSIGGG
EGDNVVIGDNEAQVIVLGPGDDQLWGGGGNDTIGSLGGDDRLFGEQGDDLLYSDSGANVF
HGGLDEDTVRYEGSRDEYVVSQLHSVITVYRHDTPEEADTLINIEQLVFADDQLTLDYDP
MLEEITALYAQVLGRQGDVEGVQYWAARQAEGLSRADLALNMMLSEEASTSLPELPENQV
EWLYQALLGRESDVAGKAYWQDELAAGHSLADITAGFLESQEMQGLHLEASQWSFIA
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgatcttttgcaacgtggaagcgacggtaacgtcttttttatcgataaaggc
attgctgattggcgatcccttgttgacggtgttccccaaggcgccgagatcgtgaccctc
gacccgtcccgcgacggcctggtgcagatggcggaatgggccgaagggaaagcaggctac
gaggccatccatatcctttcccacggcagccaaggccaggtgcagctcggcactgccagc
ctgaataacgacaccttaaccgactattccgaagcactggcgaaaatcggccagagcctg
accgaagacggcgatattttactctatggctgcgacgtcgctgccgggcaaagcggcgtg
gaatttatcggcaagctcgcacaggccacgggcgcggatgtggcggcatctaatgaccta
accggtgccgaaacaaaaggtggggattgggttttggaacagcaggtgggtgagatacaa
acccagacgctggtagggatgcaataccagcatgcgctggctgcccccaccgaccaagat
ttcacggatattcctctccacaatttttaccctttaccttataaggtcggtggggctggg
ggactaagttttgcggcgagtccgggatcctatgcagaattatacatcaccaatgagcct
accggcttcacaacgggtgatgccgcatatttctctgcccatgctggcccaacaggaata
gacagtagtgtttatgtcgaattttcctcggttgatccggatggtgatggtcctgaagcc
aagtcgctctttacccttggtcagttggcggctgggtatgaagaatattcacacttaagc
agttacgtcgtttctgggcgagccgacggcgaagaagttgtttctgttgaagttgatctg
gccactaccggcaattatgggtctggaacgagtgaaataacctatacaaaatcggcccag
gatatacagggtcacggaccttatattggcggcacgctaagctttggggacgcctggaca
aacattgataccatcaggttcacagtttttgatcccgatatgattcatgaccctctcatg
atgagcgtcaacctcttgctcgatacgattgatttcagcgagccagttcaggttgacaca
acgccgccaactgtggatgtcgttgtggctgacactagcctgattccgggtgaaacatca
acggttaccttcaccttcaacgaagccattcaaggtttctccaatgacgatcttacggtg
gcaaacggcacactcagcactgtagcgacagcggatggtggcaaaacctggacggcaaca
ttaacgccaaccgccaatatcagtgatgagaccaatgtgatcacggtgacattggacagc
gtatccgatttggcgggcaattttggcactggaaccgctaattccaataattacgctatc
aataccatcgtgcttaatacgccgaccttagcgctaggaattgacagtggtgccagtgac
agtgatggagtgaccagtaacggccaggtcaatgtctctgggttagaacaagatgctact
tgggaatacagcaccgatagcggtgagtcatggatcactggaaatggcaccagttttact
ctgcaatacgatggtgccaagagcgttatcgcacgccagagcgacattgctggcaatgcc
tcgtcgattagccaggcgctgagcttcactctggacacaactatctccactccgacatta
gccttggcagaagataacggggctgatgctaacgacggcgtcaccagcaacggccaagtt
gatgtcttcggcctagagcaaggcgccagctgggaatatagcaccgacgacggtcagaac
tggaccgccggcgaaagcagcagcgtcactctgcaaggcgacggcactaagagcgttatc
gtgcgccagaccgacgtcgctggcaatgcttcgccggctagccagacgctggacttcact
ctggatagtccaccaaccttgatttccgccagttctacccccgccgataacgcacccgat
gcttctataagtgggtcactgcagttgaagttttcggaagccatttctttcaaaaacact
gaaggaagcattaccctttacgatctcaccgatgctcaaaatccagtagcggttgaaagc
tttgatatcagtgacattgggagtggtaacggcacaatatccatcgatggcgatacgctg
accattaaccccgcgcaggatttgttattaagcacagcctatgcggtgcaaatttccagt
gacttaattcaggatgccgtgggtaacaccttcgccggcatcgtagactacaccacctac
aaattcactacgatagcgaacaccgcccccgacatcgccagcaacagcggcggcgaaaca
gccagtatcaatatcgtagaaaacagcactgccgttaccacggttaccgccactgacgcc
gacagcgataccttaacctacagcattaccggcggtgctgatcaagccaagttcaatatt
gatacaagtaccggcgtgctgagcttcaaaactgcacccaacttcgagaaccctactgat
agcgatactaacaacagctatattgtcgaagtcatcgcagatgatagtaacggtggtacg
gatgtgcagacgatcaccgtcaatgtcaccgacgtcaatgaagccccgaccaccacgggc
ctgagtgaccagagcagcgacgatgcggaggcgatctcgctggacaccgccacggccttt
gccgatgtcgacaccagcgacacgctgagctacagcgccaccggcctgcctaacgggctg
agcatggatccgacgaccggggtaatcagcggcactctcgacacctcggcctcccagagc
gggccatacaacgtcacggtcacggcgaacgacagccatggcggtagcgtggacgccacc
ttcctatgggccgtggccaaccccaccccggtagtggacgacgataccactagcaccgac
gaagataatgcactgaccgttgctgccgatggcgtcctcagcaacgacgttgacctagac
ggcgatacgctgcgggtcacgcaagtcgatggcgacgccaacaacgtcggcgagtccctg
gccggcgatagcggcggcctgtttaccgtcaaggcggacggcagctaccgcttcgacccg
gcaggcgacttcgacagcctggccgccagcgagtccagggccagcagcgtgacgtatacc
gccgaggacggggaaggcggcaccgccacggcgaccttgacggtcaccgtggccggcgtc
aacgacgccccgaccaccacgggcctgagtgaccagagcagcgacgatgcggaggcgatc
tcgctggacaccgccacggcctttgccgatgtcgacatcagcgacacgctgagctacagc
gccaccggcctgcccaacgggctaagcattgatccgatgaccggggtaatcagcggcatt
ctcgacacctcggcctcccagagcgggccatacaacgtcacggtcacggcgaacgacagc
catggcggtagcgtggacgccaccttcctatgggcagtggccaaccccaccccggtggcg
gacgccgataccactagcaccgacgaagataatgcgctgaccgttgctgccgatggcgta
ctcaccaatgacgttgacccagacggcgatacgctgagggtcgctcaagtcaatggcgac
gccagcaacgtcggcgcgcccctggccggcgatagcggcggcctgtttaccgtcaatgcg
gacggcagctaccgcttcgacccggcaggcgccttcgacagcctggccgccaacgagtcc
aggaccagcagcgtgacgtataccgccgaggacggggaaggcggtaccgccacggcgacc
ttgacggttaccgtgaccggcgtcaacgacgcccccgtgatcaccagtggtgccaccggc
acggtggaagagaacgcagccaccggcaccgtgatctataccgccgccgcgaccgatgtg
gatgccgaccaagccccggcctacattctctctggcaccgacgccgacctgctcgatatc
gacaccggcagcggcgaggtgacgctcaaggccagcgccgatttcgaggccaagccgagc
tacagcttcgaggtcatcgtcaccgatgatggtgatagctcgctcaacgctacccaagcg
gtcactgttaatgttatcgatgtcaacgacgccccgactggtatcgttgccgtcagcggc
acagtaaggcaaggcgagaccctcaccgtgtccaataccttggccgatgaagacggcctg
ggcacgatcagctaccagtggctgcgtgacggtgtggctatagagggcgccatcggagag
gcctataccttggtacgggcagatataagggcggaaataagtgttcaagccctctatacc
gatggccagggcaccgctgaaacagtgacttctctagtgactgatccagtcgttgcgctt
cccgtatcacctccacgccctgaaccggaactggagatcgatgtaacgccactcccagat
actcctgtgggagagactgctgtacgtgaaacctttaacaatacgggtgtagcgtcgcga
agtgcccggttggttgaaaacacgggtaacaataatgtcgttaccgcaacgttgccggga
ggcacgcaactaaccagtgatggagcgcgcactgccacggagcgtgaccaggcgttgacc
agtctcgttgccagtattgaaggcaaagctcctagtaatttgaccgatcagacgcaaacg
gcagccaattggctcaatactcgccctgccggtactcagctggatatccgtacgttaacc
tttacctcggataatgccactaatgatccgatcgttatccgtggtgagacagataactcc
gcgagtggttttcaggaagcatttgtgattgatgtgaccaatctcccgggcagtacacgt
ctgcagttggataatgtcgatttcgccagcattaaaggcgctgtgagcattggaggtggt
gagggtgacaatgtcgtcattggtgacaacgaggcacaagtgattgtactcgggccgggc
gatgatcaattgtggggtggcggaggtaacgacactattggttcgctgggaggtgacgac
cggctcttcggtgagcaaggtgacgatctactttactcggacagcggtgccaatgttttc
catggtggtttggatgaagataccgtccgctacgaaggaagccgtgatgaatatgtcgtt
tcgcaactgcactcggtaattacggtatatcgacatgacacgccggaagaggccgatact
ctaatcaatatagaacaactggttttcgccgacgatcaattgacgcttgactatgacccc
atgctcgaggaaatcacggctctctatgcccaagtgctggggcgtcagggtgatgtcgag
ggtgtgcagtactgggctgcccgacaggcggaagggctctctcgagctgatttggccttg
aatatgatgctgtcagaggaagcctccacgtcgctgcctgaattacccgaaaatcaggtt
gaatggctatatcaagcgttgctgggccgtgaatcggatgtggccggtaaagcctattgg
caggatgaattagccgcagggcattcgttggctgatatcaccgctggatttctggagtcc
caagaaatgcagggcctccaccttgaagcttcgcaatggtcctttattgcttga
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