Halomonas kashgarensis: R5M92_13455
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Entry
R5M92_13455 CDS
T11163
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hka Halomonas kashgarensis
Pathway
hka00521
Streptomycin biosynthesis
hka00523
Polyketide sugar unit biosynthesis
hka00541
Biosynthesis of various nucleotide sugars
hka01100
Metabolic pathways
hka01110
Biosynthesis of secondary metabolites
hka01250
Biosynthesis of nucleotide sugars
Module
hka_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R5M92_13455 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R5M92_13455 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R5M92_13455 (rfbC)
Enzymes [BR:
hka01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R5M92_13455 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
XAW59257
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All DBs
Position
2944744..2945313
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AA seq
189 aa
AA seq
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MQFEKLAIPDVVLITPQVFGDERGFFMETFRQSEFEAHCGNYQFVQDNHSKSKQGILRGL
HYQLEKPQGKVVRVTQGEVFDVAVDLRESSPTFGQWVGVYLSAENKQMLWVPPGFAHGFY
VTSEEAEFQYKCTDYYNPGDEYSLLWCDETLGIEWPLVGQQKPQLSGKDDDRSALKWTTC
PKQRHKIYL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgaaaagctagccattcccgatgtagtgctaattaccccgcaagtgttcggc
gatgaacgcgggttctttatggaaacctttcgccaaagcgaatttgaagcccactgtggc
aactaccagtttgtgcaagataaccacagcaaatcaaaacagggcattctgcgcggcctg
cactaccagttagaaaagccccaaggcaaggtggttcgcgttacccaaggggaagtgttc
gatgtagcggtagatttacgggaaagcagcccgacgtttgggcaatgggttggggtgtat
ttaagtgccgagaataagcagatgctgtgggtgccgcccggttttgctcacggcttttat
gtaacgagtgaagaagctgagtttcaatataagtgtacggattattataatccgggggat
gagtattcgctgttgtggtgtgatgagacgttgggtattgagtggccgttggttgggcag
cagaagccacagctttcggggaaggatgatgatagaagtgcgctgaaatggacgacttgc
cctaagcaacgccataaaatatacctctaa
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