Halomonas kashgarensis: R5M92_14835
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Entry
R5M92_14835 CDS
T11163
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hka Halomonas kashgarensis
Pathway
hka00900
Terpenoid backbone biosynthesis
hka01100
Metabolic pathways
hka01110
Biosynthesis of secondary metabolites
Module
hka_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
hka00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
R5M92_14835 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hka01006
]
R5M92_14835 (ispA)
Enzymes [BR:
hka01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
R5M92_14835 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
R5M92_14835 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
R5M92_14835 (ispA)
Prenyltransferases [BR:
hka01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
R5M92_14835 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
XAW59500
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All DBs
Position
3229056..3229952
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AA seq
298 aa
AA seq
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MVAATREAPVPAALAASRSRVDATLEALFARDATTPPRLEAAMRHGLLGGGKRLRPLLVY
LAGQALGADERDLDAPAAAIELIHAYSLVHDDLPAMDDDDLRRGQPTVHKAFDEATAILA
GDALQTLAFEVLAASAHPRLGSLIMTLAHAAGRDGMVAGQVLDLEAVGGHPDVDALARMH
AHKTGALIAAAVRLGALVAVDESDPRLDALGRYARAIGLAFQIHDDVLDVTGDTATLGKT
SGADAARAKPTYPGLLGLEGARNKAQALVDEAVTALAPLGDAATPLAELARYMIERDH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggtagccgccacccgcgaggcgccggtacccgccgccctggctgcgtcgcgcagccgc
gtggacgccacgctcgaggcactattcgcccgcgatgccaccacgccaccacgcctggaa
gccgccatgcgccacggcctgctgggcggtggcaagcggctgcgtccgctgctggtctat
cttgccggccaggcgctgggcgccgacgagcgcgacctcgacgctcccgccgccgccatc
gaactgattcacgcctactcgctggtgcacgatgacctgccggcgatggacgacgacgac
ctgcgccgaggccagcccacggtacacaaggccttcgatgaagccaccgcgatactggcg
ggagacgcgctgcagacgctggccttcgaggtgcttgccgcgtccgctcacccccgcctg
ggcagtttgatcatgaccctggcccatgccgccggacgcgacggcatggttgcgggccag
gtactcgacctggaagcggtgggcggccacccggatgtcgacgccctggcgcgcatgcac
gcgcacaagacgggcgcattgatcgccgccgccgtacgcctcggcgccctggtggcggta
gacgagagcgacccgcgcctggacgcgctcggccgctatgcccgcgccatcggcctggcc
tttcagatccacgacgacgtgctggatgtgaccggcgataccgccaccctgggcaagacc
tccggcgccgacgccgcccgcgccaaaccgacctatcccggcctgctgggcctggaaggc
gcccgcaacaaggcacaggccctggtagacgaggccgtgaccgccctggcaccgctgggc
gatgccgctacgccactggccgaactggcccgttacatgatcgagcgcgaccactga
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