Helcococcus kunzii: HIF96_01675
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Entry
HIF96_01675 CDS
T10363
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hku Helcococcus kunzii
Pathway
hku03030
DNA replication
hku03430
Mismatch repair
hku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HIF96_01675
03430 Mismatch repair
HIF96_01675
03440 Homologous recombination
HIF96_01675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hku03032
]
HIF96_01675
03400 DNA repair and recombination proteins [BR:
hku03400
]
HIF96_01675
Enzymes [BR:
hku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HIF96_01675
DNA replication proteins [BR:
hku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HIF96_01675
DNA repair and recombination proteins [BR:
hku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HIF96_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QZO76764
LinkDB
All DBs
Position
369757..373218
Genome browser
AA seq
1153 aa
AA seq
DB search
MIEFTHLHLHTEYSLLDGFCRIDKVLDRCEQYNMKSVAITDHGVMFGVIEFYKKAKARGI
KPIIGCEIYVTPGDYKSKTTDDKKRYHLILLAENWNGYQNLIKLVSEAHINGFYYKPRVD
KNLLRKHSDGLICLSACLSGEVQDFLRVDDYDSAKNAALEYRDIFGKDNFFLELQDHGLM
EQKKVNIFLKKLSKELSIPLVATNDAHYTDQDDAKTHDVLLCIGTGATVNQDKRMRFPNN
QFYFKSQEEMNELFKDSPEALANTQVIAERCNVDFVFHEMHLPHFEINQNHAEYLKEMTL
KGINTKYETVSSEILERTKFELDMIERMGFTDYFLIVSDFIDYAKKNGIPVGPGRGSAAG
SIVSYALGITGIDPIKYDLLFERFLNPERVSMPDIDIDFCYERRDEVIEYVKSKYGEDKV
AQIVTFGTMAARNAIRDVGRALDIDYATVDKIAKQIPQELNMTIEKALKVSKDFYQSYID
SSEKRELIDMAMAVEGMPRHTSTHAAGVVIASKSIDEFVPLIKNGEQISTQYNMIELEEL
GLLKMDFLGLRTLTVISDAVKLIYYNKGLKVNIYDIDVNDKKVMNLFTNAETIGIFQFES
EGMRAFLRDLKPTRFDDLIAANSLFRPGPMNEIPNYIKNSHNQANIQYLHPKLKPILETT
YGTIVFQEQVMQIVQQLAGFSLGEADNLRRAMGKKKMDVMEENREYFVHGKIENGEIILP
GAIRNGVDEITANKIYDLMIDFAKYAFNKSHSAAYSYIAMQTAWLKTYYPEEFMASLLSS
VMGNTAKVYLYIKEAKNLGIEILPPSVNSSFNKFSVENGKIRMGLSTIKTVGKNLVDSII
MERKKSPFISFEDFIERMVKSKTSNINKAAIEALILSGAMDSFGLKRSQMYQVYIPMIES
FSTSGRNVLTGQEDIFSILNDENTSFEIPNMDEFPKRELLKKEKEYLGVYITDHPYNSYN
ELVKDRINFTTLDLLNGNIKYNKSVYFGGIITSVKQILTKRNDDMAFLELEDNYGSIEAV
VFPSIFTKYRELIKEDNAIFINGTLQINDRDSANIIINGIKEINRENFSQNVHNNVIIDK
DKSLFLRLQTFDEKLYKQIRELLLKNKGKSEVIIYFADTEKSSRLKNIYVDLENKQLVNN
LYSLLGSDNVVIE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttacacatttacacttacatacagaatatagtttacttgatggattttgt
agaatagataaagttttagatagatgcgaacaatacaatatgaagtcagtagcaattact
gatcatggtgtaatgtttggtgtaatagagttttataaaaaagcaaaagcccgtggtatc
aagcctataattggttgtgagatctatgtcactccgggcgattataaatcaaagacgaca
gatgataaaaaaagatatcatcttattttgcttgcggaaaattggaatggataccaaaac
ttaatcaagctggtgtcggaagctcatattaatggtttttattataaacctagagtggat
aaaaatctattgcgtaaacattctgacggattgatatgtttatctgcttgtctatctggt
gaagtgcaagactttttaagagttgatgattatgattctgcaaaaaatgctgcattagaa
tatcgagatatatttggtaaagataattttttcttagagttacaagatcatggacttatg
gaacaaaaaaaggttaatattttcttgaaaaaattaagtaaggaattgtctataccgtta
gtagcaacaaatgatgctcattacacagatcaagatgatgcaaaaacacatgatgttctt
ttatgtattgggacaggtgcgacagtaaatcaagataagagaatgagatttcctaataat
caattctattttaaatctcaagaagagatgaatgaattatttaaggatagccctgaagct
ctagcaaatacacaggttatcgctgaacgatgcaatgtagattttgtatttcatgaaatg
catttacctcattttgaaattaatcaaaatcacgctgagtatttaaaagaaatgacctta
aaaggtatcaatacaaaatatgaaacagtatcttctgaaattttagaaagaactaaattt
gaattagatatgattgagagaatgggatttacagactattttcttatagtttctgacttt
attgattacgctaaaaaaaacggaatcccggtaggaccagggagaggatcagctgcggga
tcaatagtatcttatgcgttaggcataacgggtatagatcctattaaatacgatttactt
tttgaaaggtttttaaatccagagagagtatcaatgcctgatattgatatcgacttttgc
tatgaacgaagagatgaagtaatagaatatgttaaatcaaaatatggggaagataaggtt
gcacagattgttacatttggtacaatggcagctagaaatgctataagagatgtgggaaga
gcacttgatattgattatgccacggtagataaaattgccaagcaaatcccacaagagtta
aatatgacaatagaaaaagctctaaaagtttccaaagatttttatcagtcatatattgat
agttcagaaaaaagagaattgattgatatggccatggcggtagaaggtatgccaagacat
acttctacacatgctgctggtgtcgtgatagcatcgaaatccattgatgaatttgtacct
ttaataaaaaatggtgaacaaatttccacgcagtacaatatgattgaattagaagaatta
ggtcttctaaagatggatttcttaggtcttcgtacacttactgttataagtgatgcggtt
aaattgatttactataataaaggattaaaagtaaatatttacgatattgatgtaaatgat
aaaaaggtaatgaacttatttaccaacgctgaaactattggaatatttcaatttgaatca
gaaggtatgagagcatttttaagagatttaaaaccgacgagatttgatgatttaattgcg
gcgaattctctttttagaccaggaccaatgaatgaaatccctaattatataaaaaacagt
cataatcaagcaaatattcaataccttcatccaaaattaaaaccaatacttgaaacaact
tatgggacgattgtttttcaagagcaagttatgcagatagtgcagcaattagcaggtttt
agtctgggcgaagctgacaatttgcgtagagcaatgggaaagaagaaaatggatgtcatg
gaagaaaatagagaatatttcgtccatggtaaaatagaaaatggggaaattattctcccc
ggggccattagaaatggtgttgatgagataactgctaataaaatatatgatttgatgata
gattttgccaaatatgcatttaataaatcccattctgcagcttattcttatatagctatg
cagacagcttggctaaaaacttattatcctgaagaatttatggcatcacttttatcttct
gtaatgggaaatactgcgaaagtttatttatatataaaagaggcaaaaaatcttggaata
gaaattttaccaccaagtgttaatagttcatttaacaaattttctgtagaaaatggtaaa
ataagaatgggcttatccactattaaaacagttgggaaaaatttggttgattcaataata
atggaaaggaaaaaatctcctttcattagttttgaagattttattgagagaatggttaaa
tctaaaacatctaatataaataaagctgctattgaagcgcttattttatcaggtgctatg
gatagttttggtttgaaaagatctcaaatgtatcaagtctacattccaatgatagaatct
tttagtacatccggtagaaatgttttaactgggcaagaagatattttttcaatattaaat
gatgaaaatactagttttgagataccaaatatggacgaatttcctaagagagaattatta
aaaaaggaaaaggaatatttgggcgtgtacatcacagaccatccgtataattcatataat
gagttagtaaaagataggattaattttacaactttagatttattaaatggaaatataaag
tataataaatctgtgtatttcggtggaatcataactagcgtgaagcaaatcttgactaaa
agaaatgatgatatggcatttctagaattggaagataattatggaagtattgaagcggta
gttttcccttctatatttaccaaatacagagaattgataaaagaagacaatgctatattt
attaatggaacccttcaaataaatgatagagattccgcaaatataataattaatggcata
aaagaaataaacagagaaaatttttcacaaaatgtgcataataatgttataatagacaag
gataagagcttatttttaagactgcaaacttttgatgagaaattatataagcaaatcaga
gaattattgttgaaaaacaaaggaaaatcagaggtaatcatctactttgctgatactgag
aagtcgtctcgattaaaaaatatttatgtagatttagaaaataagcaactagtaaataat
ttatatagtttactaggaagcgataatgtcgttattgagtag
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