Helcococcus kunzii: HIF96_04935
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Entry
HIF96_04935 CDS
T10363
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hku Helcococcus kunzii
Pathway
hku03420
Nucleotide excision repair
hku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HIF96_04935
03430 Mismatch repair
HIF96_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hku03400
]
HIF96_04935
Enzymes [BR:
hku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HIF96_04935
DNA repair and recombination proteins [BR:
hku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HIF96_04935
MMR (mismatch excision repair)
Other MMR factors
HIF96_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_12
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
DEAD
ResIII
AAA_7
CarD_TRCF_RID
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QZO75631
LinkDB
All DBs
Position
complement(1080314..1082521)
Genome browser
AA seq
735 aa
AA seq
DB search
MTELTRNLNKEQIEAVLHTKGPLLILAGAGSGKTTVLTRKIAYLIEEKNVSEFNILAFTF
TNKAANEMKDRIGKTLNKNISHMWIGTFHSICSRILRRNIDKIGYKSNFSIYDTSETKTL
IKDIMKELRIDEKYNPIGAIISSISDYKNKFVTPDEVIDSAMYERQRNIGEIYKLYEKRK
KFNNALDFDDLILKTVELLTKNKEVREYYAEKFKYIFVDEYQDTNKSQYELIKKFTAIYD
NICVVGDGDQSIYSWRGADITNILNFEKDFKNAKVILLEQNYRSTTNILDAANDLIKNNV
ERKEKNLWSDKKDGYNIVYRNSSSEYDEADDIVNKIHQMYNAGYYYDEMAILYRTNAQSR
VLEEKLMSNHIPHKVIGGLKFYDRREVKDLLSYLAFIANPDDDISLKRIINMPKRGIGDT
TISKLESFARDNDMSIYDAVYDEGISDVLSGATLKKVQSFFDEMTSFINFVDDYLITDLV
EEVYEKSGYKKMLDSSNKIEDRTRIENISSLTSAVAEFEKKNEGATLYDYLQNVNLLSDI
DKTDDENGVSLMTIHSAKGLEYDIIFLTGMEDGLFPSLRTMEEGGLEEERRLAYVAITRA
RERLFISSAASRMVFGRSQYAKPSRFIDEIKSHIDQEKTYVEKQNENSFESFMNDFDSFE
AKRERIKKEVRAKKKQFEDSLNLNFNIGDKVAHKKFGTGMVISITKKADGDELLVSFDNN
GLKRLNAKLAKLKKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacttacaagaaatttaaataaagaacaaatagaagctgtcctacatactaaa
ggacctcttttaatactagcgggagcaggatcaggaaaaacaactgttttaacgagaaaa
attgcctatctgattgaagaaaaaaatgtgagtgaatttaatattttagcatttacattt
acaaataaagctgcaaatgagatgaaagatagaattggaaaaacattaaataaaaatatt
tctcatatgtggattggtacatttcatagtatttgttcaaggattttaagacgaaatata
gataagattggatataagagtaattttagtatttatgatacatctgaaacaaaaacttta
attaaagatattatgaaagaattgagaatcgatgaaaaatacaacccaattggagcaatt
atttcaagtatatccgactataaaaataagtttgtaacacctgatgaagttattgattct
gcaatgtatgaaagacagagaaatattggtgaaatctataaactatatgaaaaaagaaaa
aaattcaataatgcattagattttgatgatttaatcttaaaaaccgtagagcttttaacc
aaaaataaagaggtaagagaatattatgcggaaaaattcaaatatatatttgtggacgaa
tatcaagataccaataaatctcaatatgaattaataaaaaaatttacagcaatctatgat
aatatctgtgttgttggggatggcgatcaatccatttattcatggagaggggccgatatt
acaaatattttaaattttgaaaaagattttaagaatgcaaaagtgatattgttagagcaa
aactatcgttcaacaactaatatactagatgctgcaaatgacttaataaaaaataatgtt
gaaagaaaagaaaaaaatctttggtcagataagaaagatggctacaatatagtatataga
aattcttcatcagagtatgatgaagctgatgatattgtaaataagatacatcagatgtac
aatgcaggatattattatgacgaaatggccattttatataggacaaatgcacaatccaga
gttttagaagagaaattaatgtcaaatcacatcccacataaagtgatcggtggacttaag
ttttatgatagacgagaagtaaaagatttactatcttatttagcgtttatcgcaaatcca
gatgatgatatttcattaaaaagaataatcaatatgcctaaaaggggaattggtgacaca
accatttcaaaattagaatcctttgcaagagacaatgatatgagcatttacgatgctgtc
tacgatgaaggaattagtgatgtattatctggtgctacattaaagaaggttcaatcattc
tttgatgaaatgacaagttttattaattttgttgacgactatttgattacagatttagta
gaggaagtttatgaaaaatctggatataaaaaaatgcttgattcttccaataaaattgag
gatagaacaagaattgaaaatatttcctcattaacaagtgcggttgctgaatttgaaaag
aaaaatgaaggtgcaaccttgtacgattatcttcaaaatgtaaacttactttcagatata
gataagactgatgatgagaatggtgtaagtttaatgactatacattctgccaaaggactt
gaatatgatataatatttttaacaggaatggaagacgggcttttcccaagtttaagaacc
atggaagagggtggacttgaagaagagcgacgccttgcttatgttgcgattacgagagct
agagaaagattatttatttcttctgccgcttcaagaatggtgtttggtagatctcagtat
gcaaaaccttcaagattcatagatgaaataaaatcacatattgaccaagaaaagacttat
gtagaaaaacaaaacgaaaattccttcgaaagctttatgaatgattttgattcatttgaa
gctaaacgtgaaagaatcaaaaaagaagttagagccaaaaagaaacaatttgaggattcg
ttaaaccttaacttcaatattggtgataaagtagctcataaaaaattcggtacaggaatg
gttatttccattacaaaaaaagcggatggagatgagctattggtaagttttgataataac
ggactaaaaagattaaatgccaaattagcaaaactaaaaaaattataa
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