Helcococcus kunzii: HIF96_07880
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Entry
HIF96_07880 CDS
T10363
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
hku Helcococcus kunzii
Brite
KEGG Orthology (KO) [BR:
hku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hku03021
]
HIF96_07880
Transcription machinery [BR:
hku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HIF96_07880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_23
HTH_24
HTH_28
IF2_N
Trp_repressor
P3A
MarR
PND
DUF1664
CDC24_OB1
Motif
Other DBs
NCBI-ProteinID:
QZO76196
LinkDB
All DBs
Position
complement(1787583..1788434)
Genome browser
AA seq
283 aa
AA seq
DB search
MKENKNSDNKIRDYDDFKRLQTLREEEKKLEKSDLNEKNKKELDKVKRKIKIIRDSLIEK
NLYIAEILAKKYANKGIEYDDLYQIASLGLILAVDRFNVDRGFEFSSYATPTITGEIKRY
FRDKGWVIRVPRRIQELSKRVNNAKAELTQRLKKNPSIDEIAELLEVSSEEIIEAMDASQ
VYSPQSIDKNLDTSSEDREVSFADLLGEEDKNYQLVDDMSFIRGAMDNFTDIEKKIVVYR
YFEKMTQVAIAEKLDVSQMTVSRLEKKVIKKFREELGIKVNNK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaacaaaaactcggataataaaattagagattatgatgattttaagaggtta
cagacgcttcgagaagaagaaaaaaagcttgagaaatcagatctaaatgaaaaaaataaa
aaagaacttgataaggtgaaaagaaaaattaaaattatccgtgattctctaattgaaaaa
aatctttatattgcagaaattttagcaaaaaaatatgcaaataaaggtattgaatatgac
gatttatatcaaatagcttcacttgggttaattttagctgttgacagatttaatgtcgat
agaggttttgaattttcttcttatgctacacctactataactggagaaatcaagagatat
ttcagagataagggttgggtaattagagtaccaagaagaattcaagagctttcaaagagg
gtaaataatgctaaagctgagttaactcaaagacttaagaaaaatcctagtattgatgag
attgcagaattattggaagtttcatcagaagagattattgaagcaatggatgcatcacaa
gtttattcaccacaatctattgacaaaaacttagatacttcctctgaagatagggaagtt
agttttgcagatttactaggtgaagaagataaaaattatcaattagttgatgatatgtca
tttattcgtggtgcgatggataattttactgatatcgaaaagaaaattgtagtttataga
tattttgagaaaatgactcaagtagccatagctgagaagcttgatgtcagtcagatgact
gtttcaagacttgaaaagaaagtaattaaaaaatttagagaagaactagggataaaggtg
aataataaatag
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