Halorubrum lacusprofundi: Hlac_0076
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Entry
Hlac_0076 CDS
T00856
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_0076
Enzymes [BR:
hla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Hlac_0076
Transfer RNA biogenesis [BR:
hla03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Hlac_0076
Prokaryotic type
Hlac_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ACM55682
UniProt:
B9LQT0
LinkDB
All DBs
Position
1:complement(80775..81707)
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AA seq
310 aa
AA seq
DB search
MSLRVTFLGTGGAVPTTERAPSALFVNREGDRLLFDCGEGTQRGMMRFGTGFGIDHLFVS
HLHGDHVLGIPGLVQTLGFNDRAEPLTIHCPPGTEDDLHDLVHAVGHDPAFQIRIESVAP
GEVALDADGYEVRAFETVHRTKSQGYVLEEDDRPGRFDRPKAEELGVPVGPKFGRLHEGE
PVEAEDGSIVEPDQVVGPPRPGRKFVYTADTRPREGTVAVAEDADLLVHDATFADDMEDR
ARDTAHSTGREAGSVAERAGAKRLALVHISSRYAADASPIRREAREAFDGECLLPDDGDL
IEVPFPDADE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcgcgtcaccttcctcgggacgggcggcgccgttccgaccaccgagcgcgcg
ccgagcgcactgttcgtcaaccgcgagggcgaccgcctgctgttcgactgcggagagggc
acgcagcgcggcatgatgcggttcggaaccggtttcgggatcgaccacctgttcgtctcg
cacctccacggcgaccacgttctcgggattccgggactggtccagacgctcgggttcaac
gaccgggcggagcccctgacgatccactgcccgccggggaccgaagacgacctccacgat
ttggtccacgcggtcggtcacgaccccgcgtttcagattcggatcgagtccgtcgccccg
ggcgaagtcgcgctcgacgccgacggctacgaagtccgcgcgttcgagacggtccaccgg
acgaagtcgcaggggtacgtcctcgaagaggacgaccgtcccggccggttcgaccgcccg
aaggccgaggagttgggcgtgcccgtcggcccgaagttcggccggctccacgagggcgaa
cccgtcgaagccgaggacgggtcgatcgtcgagcccgatcaggtagtggggccgccgcgt
cccgggcgaaagttcgtctacaccgccgacacccgtccgcgagaggggaccgtcgcagtc
gcggaggacgccgacctgctcgtccacgacgccaccttcgccgacgacatggaggaccgc
gcccgcgacacggcccactcgaccggtcgagaggccgggtcggtcgccgagcgcgccggc
gcgaagcggctcgcgctggtccatatctcctcgcggtacgccgccgacgcctcgccgatc
cgccgcgaggcgcgggaggcgttcgacggcgagtgtctcctccccgacgacggcgacctg
atcgaggtgccgttccccgacgcggacgagtag
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