Halorubrum lacusprofundi: Hlac_0106
Help
Entry
Hlac_0106 CDS
T00856
Name
(GenBank) RNA polymerase Rpb2 domain 6
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hlac_0106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_0106
Enzymes [BR:
hla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hlac_0106
Transcription machinery [BR:
hla03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hlac_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
ACM55712
UniProt:
B9LQW0
LinkDB
All DBs
Position
1:complement(110547..112376)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEREAKVYVNGSLVGTHPDPEALAEQIREARRRGDVSEMVNVSVKDRTQEVIVNADA
GRARRPLIVVENGEPLLGDEEIEALERGDVEFEDLVERGYVEFIDAEEEEDILVAVDEED
VTDDHTHLEIDPQLVFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTRQ
HLLHYPQLAMVKTQTSDQISFDKRPAAQNFVVAVMSYEGFNIEDALVMNQGSVDRALTRS
HFFRTYEGEERRYPGGQEDRFEIPDQDVRGARGEDAYTHLDEDGLVNPETKVDESSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVKVRDQR
VPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVMNPHALPSRMTVGHVLEMLGG
KVGSLRGSRVDGTPFQGEDEEELRGGLEEHGFKSSGKEVMYSGVTGEKIEAEIFVGTIFY
HKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDTIIGHGASMVLNERLL
ESSDAETVHVSAETGLVAVEDREQRRVYDPVTGDEDDIHELEVSYAFKLLLDEMIALGIR
PKLELEDAI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcagaacgcgaagcgaaggtgtacgtcaacgggagcctcgtggggacccat
ccggaccccgaggcgctcgcagaacagatccgcgaggctcgccgacgcggcgatgtctcg
gagatggtgaacgtctcggtcaaagaccggacccaggaagtgatcgtcaacgcggacgcg
ggacgcgcccgtcgtccgctgatcgtcgtcgagaacggcgagcccctcctgggcgacgag
gagatagaggccctcgaacgcggcgacgtggagttcgaggatctcgttgagcgcggctac
gtcgagttcatcgacgccgaggaagaggaggacatcctcgtggctgtcgacgaagaggac
gtgaccgacgaccacacgcacctcgagatcgacccgcagctcgtgttcggtatcggcgca
gggatgattccctaccccgagcacaacgcgagcccccggattacgatgggcgcggggatg
atgaagcagtcgctcggactcccttccgccaactaccgcatccggccggacacgcgccag
cacctgctgcactacccgcagctggcgatggtgaagacgcagacgtccgaccagatcagc
ttcgacaagcggccggcggcgcagaacttcgtcgtcgccgtgatgagttatgaggggttc
aatatcgaggacgcgctcgtgatgaaccagggctccgtcgaccgcgcgctcacccgctcg
cacttcttccggacctacgagggcgaggagcgccggtaccccggcggacaggaggaccgc
ttcgagattcccgatcaggacgttcgcggcgcgcgcggcgaggacgcgtacacccacctc
gacgaggacggcctcgtcaacccggagacgaaggtggacgagtcctcggtgctgctcggc
aagaccagcccgccacgcttccttgaggagcccgacgacatgggcggactctccccgcag
aagcggcgcgagacgagcgtgacgatgcgttcgggcgaatctggcgtcgtcgacaccgtg
acgctgatggagggcgaggacggctccaagctctcgaaggtgaaggtgcgcgaccagcgc
gtccccgagcttggggacaagttcgcgtcccgacacggacagaagggcgtcgtgggccac
ctcgcgccccaagaagacatgccattcaccgaggagggggtcgttcccgacctcgtgatg
aacccgcacgccctcccgtctcggatgacggtcggccacgtgctggagatgctcggcggc
aaggtcggctcgctgcgcggctcgcgggtcgacggcacgccgttccagggcgaagacgag
gaggagctccgcggcgggctggaggaacacggcttcaaatcctccggcaaggaggtcatg
tactccggcgtcaccggcgagaagatcgaggcggagatcttcgtcgggacgatcttctac
cacaagctgtaccacatggtgtcgaacaagctccacgcccgctcgcgcggtccggtgcag
gtgctcacgcgccagccgaccgaggggcgcgcccgcgagggcggcctgcgcgtcggggag
atggagcgcgacacgatcatcggccacggcgcgtcgatggtgctcaacgagcggctcttg
gagtcctcggacgctgagacggtacacgtctccgcggagaccgggctcgtcgccgtcgag
gaccgcgagcagcgccgcgtgtacgacccggtcacgggcgacgaggacgacatccacgag
ctcgaggtgagctacgcgttcaagctcctcctcgacgagatgatcgcccttggcatccga
ccgaagctcgaactggaggacgcaatttaa
DBGET
integrated database retrieval system
