Halorubrum lacusprofundi: Hlac_0111
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Entry
Hlac_0111 CDS
T00856
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03030
DNA replication
hla03420
Nucleotide excision repair
hla03430
Mismatch repair
hla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hlac_0111
03420 Nucleotide excision repair
Hlac_0111
03430 Mismatch repair
Hlac_0111
03440 Homologous recombination
Hlac_0111
03460 Fanconi anemia pathway
Hlac_0111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hla03000
]
Hlac_0111
03032 DNA replication proteins [BR:
hla03032
]
Hlac_0111
03400 DNA repair and recombination proteins [BR:
hla03400
]
Hlac_0111
Transcription factors [BR:
hla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Hlac_0111
DNA replication proteins [BR:
hla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Hlac_0111
DNA repair and recombination proteins [BR:
hla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Hlac_0111
MMR (mismatch excision repair)
Hlac_0111
DSBR (double strand breaks repair)
HR (homologous recombination)
Hlac_0111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_MEIOB_N
OB_Ssb-like
RADX
Motif
Other DBs
NCBI-ProteinID:
ACM55717
UniProt:
B9LQW5
LinkDB
All DBs
Position
1:complement(116382..117887)
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AA seq
501 aa
AA seq
DB search
MGVIEDVYEDLDTDVEFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEADTIADIE
PGMNDVKFLGKVTSIGDIRTFERDDEDAEEGRVCNVDVADASGSVRVALWDDMAAAAEEQ
LEVGQVLRVMGRPKEGYSGLEVSADKVEPDEDAEVDVQVLDTYRVEDLSLGASDVDLVGQ
VLDTDSIRTFDRDDGSEGRVANLTVGDETGRVRVTLWDDKADLVEEFEAGEVVEVGDGYV
RERDGDLELHVGDRGTVERVDEDVEYVPETTDIAELEIGETVDIGGGVIETDPKRTFDRD
DGSEGQVRNVRIKDDTGEIRVALWGDKADREIELADRVVFTDVEVQDGWQDDLEASANWR
STVTVLDEGSDAVGGASGSGSAGSSDDGDAHGTNNTGLGAFAGDEQKAAAEAVAGETGGD
GGNSGVGGGNGGSGGAATATAEQSAEEIEFTGTVVQTGDPVVLDDGQRTKSVETDASLRL
GEEVTVRGTERDGTIDADDVF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgatagaggacgtctacgaggatctcgacaccgatgtcgagttcgaggaattc
gaggcagccgtcgaggacaaagtggagcagatgggcggactcgccgacgaggagaccgcg
gccatgctcatcgcccacgagctgcgcgacgaggaggccgacacgatcgccgacatcgag
cccggcatgaacgacgtgaagttcctcgggaaggtgacctccatcggcgacatccgcacg
ttcgagcgcgacgacgaggacgccgaggagggccgcgtctgcaacgtcgacgtggcggac
gcctccggctccgtgcgcgtcgcactgtgggacgatatggcagccgcggccgaagagcag
ttggaggtcggacaggtgctccgcgtcatgggccgcccgaaagaggggtacagcggactc
gaagtgagcgcggacaaggtcgagccggacgaggacgccgaggtcgacgtgcaggtgctc
gacacctatcgggtggaggacctctcgctcggtgcctccgacgtggacctcgtcgggcag
gtgctcgacacggactcgatccgcacgttcgaccgcgacgacggctctgaggggcgggtc
gccaacctcaccgtcggcgacgagacgggtcgcgtgcgcgtaacactttgggacgacaag
gccgacctcgtcgaggagttcgaggccggcgaggtcgtcgaggtcggcgacggctacgtc
cgcgagcgcgacggcgacttggagctccacgtcggcgaccgcggcaccgtcgagcgcgtc
gacgaggacgtggagtacgtcccggagaccacggacatcgccgaactggagatcggcgag
accgtcgacatcggcgggggcgtcatcgagacggatccgaagcgcacgttcgaccgcgac
gacggctcggaagggcaggtccggaacgtccgcatcaaggacgacaccggcgagatccgc
gtcgcgctgtggggcgacaaggccgaccgtgagatcgagctggccgaccgcgtcgtcttc
accgacgtggaggttcaggacggctggcaggacgacctcgaggcctccgcgaactggcgt
tcgacggtcaccgtcctcgacgaagggagcgatgcggtgggcggcgcctcagggtccggt
agcgccgggagcagcgacgacggcgacgcgcacgggacaaacaataccgggctcggcgcc
ttcgctggagacgaacagaaggcggccgccgaggccgtcgccggcgagaccggcggagac
ggtgggaacagcggggtcggcggcgggaacggtggatccggcggcgccgcgaccgcgaca
gcggagcagtcggccgaagagatcgagttcaccgggacagtcgtccagaccggcgatcct
gtcgtgttggacgacggccagcggacgaagagcgtcgagaccgacgcgagcctccggctc
ggcgaggaggtcacggtgcgcgggacagaacgagacggaacgatcgacgccgacgacgtg
ttctaa
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integrated database retrieval system
