Halorubrum lacusprofundi: Hlac_0119
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Entry
Hlac_0119 CDS
T00856
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hlac_0119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hla03400
]
Hlac_0119
DNA repair and recombination proteins [BR:
hla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Hlac_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_27
LRIM1_dimer
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACM55725
UniProt:
B9LQX3
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All DBs
Position
1:complement(123768..126563)
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AA seq
931 aa
AA seq
DB search
MPTGIVGEFLDLKAETDADILAMQCGDFYEFFADDAELVADELDLTVSQKSSHGSSYPMA
GVPLSELTPYVKALVERGYRVAVADQYETEDGHAREITRVVTPGTLLETADDDARYLAAI
VREGDDADGPYGLALADVTTGRFLVTEVDDEGDLRAELYRFDPAEVLPGPRVRNDDRLLG
AVREDLSGSVSVFDAEAFAPGRAKHAVREQFGRETADSVGIDSELALRAAGAVLGYVEET
GAGVLASITRLTAYGDGDHVAVDATTQRNLELTETMRGDADGSLFETVDHTVTAAGGRLL
REWITRPRRDREELNRRLDAVEALASAALARDRLRETLGDAYDLERLAARATSGSAGARE
LLSVRDSLALVPALADAVSGTALADSPVAAVLERIDRERAATLHDELADALAEDPPKTKT
QGGLLRVGYDGELDELIARHEKANEWLDRLAEREKRQYGLSHVTVDRNKTDGYYIQVGKS
AADGVPEHYREIKTLKNSKRFVTDELEEREREVLRLEEARGELEYELFEELRERVAADAE
LLQDVGRAVAEIDALASLATHAAGNDWTRPELADERRLDVEAGRHPVVERTTDFVPNDLR
LDGERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARTATVGLVDGIYTRVGALDE
LAQGRSTFMVEMQELSNILHSATADSIVILDEVGRGTATYDGISIAWAATEYLHNEVRAR
TLFATHYHELTTLADHLPRVENVHVAVDKRDGEVTFLRTVRDGPTNRSYGVHVADLAGVP
APVVSRAGTVLDRLREEKAIEAKGGARGGGGERGGFTGTADGDTKQVVFDLSSGSFSESD
DAESTAAGAPGSGGGRNGATPGSASDGASGSAGTAETAGAAETAESAETDRFDPETRAVI
EELADVDVAETAPVELLSRVQEWQERLDENR
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgccaacggggatcgtcggggagttcctcgacctcaaggccgagaccgacgcggacatc
ctcgccatgcagtgcggcgacttctacgagttcttcgcggacgacgccgagctggtcgcc
gacgagctggacctgaccgtctcacagaagtcctcgcacggctcgtcgtacccgatggcg
ggcgtgccgctctcggagctgaccccgtacgtgaaggcgctcgtcgagcgcggctaccgg
gtcgccgtcgccgaccagtacgagaccgaggacggccacgcccgggagattacccgcgtc
gtcacgcctgggacgctcctcgaaaccgccgacgacgacgcgcggtacctcgcggcgatc
gtccgcgagggcgacgacgcggacggcccctacgggctcgcgctcgccgacgtgaccacg
ggccggttcctcgtcaccgaagtcgacgacgagggcgacctccgcgcggagctgtaccgc
ttcgaccccgccgaggtgctcccgggaccgcgcgtccgcaacgacgaccgactgctcgga
gcggtccgagaggacctctcggggtcggtttccgtcttcgacgcggaggcgttcgcgccg
ggacgcgcgaaacacgcggtccgcgagcagttcgggcgggagaccgccgacagcgtcggc
atcgactccgaactggcgctgcgcgcggcgggagccgtcctcggctacgtcgaggaaacc
ggcgccggcgtgttggcatcgatcacccgtctcacggcctacggcgacggcgaccacgtc
gccgtcgacgccacgacccaacgcaacctcgaactcaccgagacgatgcgcggcgacgcc
gacggctcgctgttcgagacggtcgatcacaccgtcaccgccgccggcggccgcctcctc
cgagagtggatcacccgcccgcgccgggaccgcgaggaactgaaccgccggctcgacgcg
gtggaggcgctcgcgtcggcagcgctcgcgcgcgaccgcctgcgagagacgctcggcgac
gcgtacgatctcgaacggctcgcggcgcgggcgactagcgggagcgcgggcgcgcgggaa
ctcctttcggtgcgggactcgctggcgctggtgcccgcgctcgccgacgccgtgtccggg
accgcgctcgcggactccccggtcgcagcggtgctggagcgaatcgaccgcgagcgcgcc
gcgaccctccacgacgaactcgcggacgcgctcgcggaggacccgccgaagacgaagacg
cagggcgggctactcagggtgggatacgacggcgagctcgacgagctgatcgcgcgccac
gagaaggcgaacgagtggctcgataggctcgcagagcgcgaaaagcggcagtacgggttg
agtcacgtcaccgtcgaccgcaacaagacggacggttactacatccaggtcggcaaatcc
gcggccgacggggttcccgagcactaccgcgagatcaagacgctgaagaactcgaagcgg
ttcgtcaccgacgaactggaagagcgggaacgcgaggtgctccggttggaggaggcccgg
ggcgagctggagtacgagctgttcgaggagctccgagagcgggtcgccgccgacgccgaa
ctcttacaggacgtggggcgagcggtcgccgagatcgacgcgctcgcgtcgctggcgacc
cacgccgccggcaacgactggacgcgacccgaactcgccgacgagcgccggctcgacgtc
gaggccgggcgccacccggtcgtcgagcggacgaccgatttcgtgccgaacgatctccgg
ctcgacggggagcgcggcttcctcatcgtcaccgggccgaacatgagcgggaaatcgacg
tatatgcggcaggcggcgctgatccagctgctcgcgcaggcggggtcgttcgtccccgcg
cggacggcgacggtcgggctcgtcgacggaatctacacccgcgtcggcgcgctcgacgag
ctggcacaggggcgctccacgttcatggtggagatgcaggagctgtcgaacatcctccac
tcggcgaccgccgactcgatcgtcatcctcgacgaggtcggccgcggcaccgccacctac
gacggcatctccatcgcgtgggccgcgaccgagtatttacataacgaggtgcgcgcgcgg
accctcttcgccacgcactaccacgagctgacgacgctggcagaccacctcccgcgcgtg
gagaacgtccacgtcgccgtcgacaagcgcgacggcgaggtgacgttcctccggaccgtt
cgcgacggcccgacaaatcggtcgtacggggtccacgtcgccgacctcgcgggcgttccg
gctccagtcgtctcccgcgccgggacggtgctcgaccggcttcgcgaggagaaggcgatc
gaggcgaagggcggagcgcggggcggagggggcgaacgcggaggcttcaccggcaccgcc
gacggcgacacgaaacaggtcgttttcgacctctcgtccgggtcgttctctgaaagcgac
gacgcggagtcgaccgcggccggcgcccccggctccggaggaggtcgaaacggggcgact
ccggggtcggcatcggacggcgccagtgggtccgcggggaccgcagagaccgcaggagcc
gcagagaccgctgaaagcgcggagaccgaccggttcgatcccgagacccgcgccgtgatc
gaggaactggccgacgtcgatgtcgcggagaccgcgccggtggagttgctgtctcgggtt
caagagtggcaagagcggctcgacgagaaccgctga
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