Halorubrum lacusprofundi: Hlac_0170
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Entry
Hlac_0170 CDS
T00856
Name
(GenBank) eRF1 domain 2 protein
KO
K03265
peptide chain release factor subunit 1
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Hlac_0170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hla03019
]
Hlac_0170
03012 Translation factors [BR:
hla03012
]
Hlac_0170
Messenger RNA biogenesis [BR:
hla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Hlac_0170
Translation factors [BR:
hla03012
]
Eukaryotic type
Release factors
Hlac_0170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
ZnF_RZ-type
RbpA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACM55775
UniProt:
B9LRF2
LinkDB
All DBs
Position
1:183918..185168
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AA seq
416 aa
AA seq
DB search
MSSDAQEASDDRRKYEFRKVIEELRDFEGSGTQLVTIYIPEDRQVSDVVAHVTQEHSEAS
NIKSKQTRTAVQDALTSIKDRLRYYDTFPPENGMVIFSGAIDAGGGQTDMVTRTLESPPQ
PVESFRYHCDSAFLTEPLEHMLEDSGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVDKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVAYTDESGLKDLVDNASEALADQEIVEDKRHMDEFFENLHTGEE
ATYGFDQTRRNLIMGSVDRLLISEDLRSDVVVYECPNGHEEYEVVDSRHSTPSHECSECG
EEADVDEREDVIEHLMSIAEQRGTDTKFISTDFEKGEQLLDAFGGIAGILRYSTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacgcccaagaggcgagcgacgaccggcggaaatacgaattccgcaaggtc
atcgaggagctccgcgacttcgagggctccggaacgcagctcgtcaccatctacatcccc
gaggatcggcaggtctccgacgtggtcgcccacgtcacacaggaacacagcgaggcgtcc
aacatcaagtccaagcagacccggacggccgtccaggacgcgctcacctcgatcaaggac
cgcctccggtactacgacaccttcccgccggaaaacgggatggtgatcttttcgggagcg
atcgacgccggcggcggccagaccgacatggtcacccgaacgctggagtcgccgccccag
cccgtcgaatcgttccggtaccactgcgactccgcgttcctcaccgaaccgctcgaacac
atgctggaggactccgggctgttcgggctcatcgtcttggaccgccgcgaggccaacgtc
ggctggttgaagggcaagcgggttgagcccgtcaagtccgcctcctcgctcgtccccggc
aaacagcggaaagggggccagtccgcacagcggttcgcccgcctccgcctggaggccatc
gacaacttctaccaggaggtcgcggggatggccgacgacctgttcgtcgacaagcgccac
gagcttgacggtatcctcgtcggcggcccctcgccgacgaaagacgagttcctcgacggc
gactatctccaccacgagcttcaggacaaggtgctcggcaagttcgacgtggcgtacacc
gacgagtccgggctgaaagacctcgtcgacaacgcgagcgaggcgctcgccgatcaggag
atcgtcgaggacaaacgccacatggacgagttcttcgagaacctccataccggcgaggag
gccacgtacggcttcgatcagacccgtcgaaatctgatcatgggctctgtcgaccgcctg
ctcatctccgaggatctccgatctgacgtggtcgtctacgagtgtccgaacggccacgag
gagtacgaggtagtcgactcgcgacactccaccccgtctcacgagtgttcggagtgcggc
gaagaggccgatgtcgacgagcgcgaggacgtgatcgagcacctgatgtcgatcgccgaa
cagcgtggcaccgacaccaagttcatctccaccgacttcgagaagggtgaacagctgctc
gatgccttcggtgggatcgcgggtattctgcgctactcgacgggcgtctga
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