Halorubrum lacusprofundi: Hlac_0259
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Entry
Hlac_0259 CDS
T00856
Name
(GenBank) DNA topoisomerase type IA central domain protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hla03032
]
Hlac_0259
03400 DNA repair and recombination proteins [BR:
hla03400
]
Hlac_0259
Enzymes [BR:
hla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hlac_0259
DNA replication proteins [BR:
hla03032
]
Prokaryotic type
DNA Topoisomerases
Hlac_0259
DNA repair and recombination proteins [BR:
hla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hlac_0259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
HHH
DNA_pol_lambd_f
Cdd1
DUF4332
Zn_ribbon_PaaD
DUF6891
Toprim_2
IMS_HHH_1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ACM55864
UniProt:
B9LRP1
LinkDB
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Position
1:complement(279524..282118)
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AA seq
864 aa
AA seq
DB search
MSRGPELIITEKDNAARRIADILSGESATAERENDVNVYKWGGKRCIGLSGHVVGVDFPA
EYNDWRDVEPVELIDAPITKEPTQEGIVAALRKLARNASRVVIATDYDREGELIGKEAYE
LVREVNEDAPIDRVRFSSITDNEVNEAFANPDELDFDLAAAGEARQVIDLTWGAALTRFL
SLSARQLGEDFISVGRVQGPTLKLIVDREREIKAFDPEAYWELYGNLTKSGGDPFEARYF
YLNDEGNEAERVWNGDVAEVLTEAFDAADEAVVDDVRRRTRTDDPPTPFNTTAFIRAAGS
LGHSAQRAMSLAEDLYTAGYVTYPRTDNTVYPEDLDPRELIEELSVASTFGKDAKSLLEQ
EEIEPTEGDEETTDHPPIHPTGELPSASDLSEDEWEVYELIVRRFLATCAEPATWERLRV
VALANDEATAIAERADGLAALRNPEEASGPGDLVADGGLRLKANGKRLLEAGYHDVYPYR
SSDERIVPDVEVGETLALTDRRTDAKETQPPRRYGQSRLIEEMEKRGVGTKATRHRTLEK
LYDRNYIESDPPRPTRLAEAVVEAAEEFAEHVVSEEMTAQLERDMQAIAAGEKGYDEVTE
ASRELLNRVFDDLTESREAVGDHLQKSLKADKTLGPCPECGSDLLVRKSRQGSYFVGCDG
YPDCEYTLPLPSSGKPLLLDETCEEHELRHVKMLAGRKTFVHGCPQCKADEADEQEDEVI
GACPECGEEHGGELAIKRLRSGSRLVGCTRYPDCDYSLPLPRRGEIEVTDEICEEHGLPH
LRVHSGDEPWELGCPICNYREFTARQEGSELQTVEGIGEKTAEKLKDAGVDGVDDLKSID
PDELAADVDGVGADTVRDWQAKAD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcggccccgaactgataatcacggagaaagacaacgcggcgcgtcgcatcgcc
gacatcctgagcggcgagtccgcaacggcggagcgggaaaacgacgtgaacgtgtacaag
tggggcggcaagcgctgtatcggcctctcgggtcacgtcgtcggcgtcgacttccccgcc
gagtacaacgattggcgcgacgtggaacccgtcgaactgatcgacgcaccgatcaccaaa
gagcccacccaagagggaatcgtcgcggccctccggaaactggcgcgcaacgcctcccga
gtcgtcatcgcgaccgactacgaccgcgagggcgagctgatcggcaaggaggcgtacgag
ctggtgcgcgaggtgaacgaggacgctcccatcgaccgcgtccggttctcctcgatcacc
gacaacgaggtaaacgaggcgttcgcgaaccccgacgagctcgacttcgatctggccgcc
gccggggaggcccggcaggtgatcgacctgacgtggggcgcggcgctcacccgcttcctc
tcgctgtccgcccgccagctcggcgaggacttcatctccgtgggccgggtgcagggaccg
acgctcaagctgatcgtcgaccgcgagcgagagatcaaagcgttcgatcccgaagcgtac
tgggagctgtacgggaacctgaccaagtccggcggcgaccccttcgaggcgcgctacttc
tacctgaacgacgagggcaacgaggccgagcgcgtctggaacggcgacgtcgcggaggtc
ctcacggaggcgttcgacgcggccgacgaggcggtcgtcgacgacgtgcgccggcggacc
cgcaccgacgacccgccgaccccgttcaacaccacggcgttcatccgcgccgcaggctcg
ctcggacactccgcgcaacgcgcgatgtcgctcgctgaggacttgtacacggctggctac
gtcacctacccccggactgataacacggtgtacccagaggatctcgacccccgcgagctg
atcgaggagctgtcggtcgcctcgacgttcgggaaagacgcgaagagcctcctcgaacag
gaggagatcgagcccaccgagggcgacgaggagacgaccgatcacccgccgatccacccg
accggggagcttccctccgcttccgacctctcggaggacgagtgggaggtgtacgagctg
atcgtccgccgcttcctcgcgacctgcgccgagcccgcgacgtgggagcggctccgcgtc
gtcgcgctcgcgaacgacgaggcgaccgcgatcgccgagcgcgcggacgggctcgccgct
ctccgcaatcccgaggaggcgagcggccccggcgacctcgtcgccgacggcgggctccgg
ctgaaggcgaacgggaagcgcctgttggaggccggctaccacgacgtgtacccgtaccgc
tccagcgacgagcggatcgtccccgacgtcgaggtcggcgagacgctcgcgctcaccgac
cggcggacggacgcgaaggagactcagccgccccgtcgatacgggcagtcccggctcatc
gaggagatggagaagcgcggcgtcggcacgaaggcgacccgacaccgtaccctcgaaaag
ctgtacgaccgcaactacatcgagagcgacccgccgcggccgacccggctcgcggaggcg
gtcgtcgaggccgcagaagagttcgcggaacacgtcgtgagcgaggagatgaccgcccag
ctcgaacgcgacatgcaggcgatcgcggccggcgagaaggggtacgacgaggtgaccgag
gcatcccgcgagctgctcaaccgcgtgttcgacgacctcaccgagtcgcgcgaggcggtc
ggcgaccacctccagaagtcgctgaaggcggataagacgctcggcccctgcccggaatgc
ggctccgacctcctcgtccgaaagtctcgacaggggtcgtacttcgtcggctgcgacggc
tacccggactgtgagtacacccttccgctcccctccagcgggaagccgctgctcttagac
gagacctgcgaggagcacgaactccggcacgtgaagatgctcgcaggccggaagacgttc
gtccacggctgcccgcagtgcaaggccgacgaggccgacgagcaggaagacgaggttatc
ggggcgtgtccggagtgtggcgaggagcacggcggagagttagctatcaagcggctccgc
tctggctcccgactcgtcggctgcacgcgctaccccgactgcgactactcgctgccgctc
ccccggcgcggtgagatcgaggtcaccgacgaaatctgcgaggagcacggccttccgcac
ctccgggtccactccggcgacgagccgtgggagctcggctgtcccatctgcaactaccgg
gagttcaccgcccggcaggagggctcggagctccagaccgtcgaagggatcggcgagaag
accgccgagaagctgaaagacgccggcgtcgacggcgtcgacgacctcaagtcgatcgat
ccggacgagttggcggccgacgtcgacggcgtgggcgcggacacggtccgcgactggcag
gcgaaggcggactaa
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