Halorubrum lacusprofundi: Hlac_0397
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Entry
Hlac_0397 CDS
T00856
Name
(GenBank) ABC transporter related
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hla03009
]
Hlac_0397
Ribosome biogenesis [BR:
hla03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Hlac_0397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_16
AAA_23
AAA_29
AAA
Fer4_6
AAA_22
Rad17
AAA_14
Fer4
AAA_24
NB-ARC
Fer4_7
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
ACM56000
UniProt:
B9LST5
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All DBs
Position
1:414839..416659
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AA seq
606 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECANYCPPNRTGKECITKRGEDAAEGDPDQIHISEEICL
GETCGICVEKCPFDAIEIINLPSELDEEPVHRYGDNAFSLYGLPTPKPGNVTGILGPNGI
GKSTAVHALAGEMVPNLGDYESEGDWERVLDRFRGTGLQNYLQSLKEGDVTVARKPQYVD
QIPNQFDGNTRELLERTDERGALDSLIDRLNIRPVMDQPIDSISGGELQRVAIAACLARD
ADFYFLDEITPYLDIGQRMIVARLIRELADDDAAERSMLVVEHDLAILDLLADTLHVAYG
EPGAYGVVTDPKSVRNGINEYLKGYLDNENMRIRPSAITFEEHAPRVSSRSETLIEYPEL
SKSYGDGEFELHVEGGEINRSEVLGVVGPNGIGKSTLAKLFAGSLEPDEGELDFALDIAY
KPQYIDIDQPMRVDVFLSSITDDFGSSYWNTEIAQPLQLDRVMEQNLSDLSGGERQRVAI
AACLSEDADLYLLDEPSAHLDVEQRVRATTAIRRYAENHDATVMVIDHDIYMIDLLADRL
MVFDGEPAERGHATPPQEMRDGMNEFLADLDITFRRDERTGRPRINKPGSQLDSSQKRDG
EYYYSG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagcatcgcggtcgtcgacctcgatcgatgccagcccgaccggtgtaac
tacgagtgcgcgaactactgcccgccaaaccggacgggcaaggagtgcatcacgaagcgc
ggcgaggacgcggccgagggcgacccggaccagatccacatctccgaggagatctgtctc
ggagagacctgcgggatctgcgtcgagaaatgcccgttcgacgcgatcgagatcatcaac
ctcccctccgaactcgacgaggagccggtccaccgctacggcgacaacgccttctcgctg
tacgggctcccgaccccgaagccgggcaacgtcaccggcatcctcggtccgaacgggatc
gggaagtcgacggcggtccacgcgctcgccggcgagatggtcccgaacctcggcgactac
gagtctgagggcgactgggagcgcgtgcttgaccgattccgcggcacggggctgcagaac
tacctccaatcgctgaaggagggagatgtgacggtcgcgcggaagccgcagtacgtcgac
cagatcccgaaccagttcgacggcaacacccgcgagctgttggagcgcaccgacgagcgc
ggcgcgctcgactccctcatcgaccggctcaacatcaggccggtgatggaccagccgatc
gactccatctccggcggcgagctccagcgcgttgccatcgcggcgtgtctcgcccgcgac
gccgacttctacttcctcgacgagatcacgccgtacctcgatatcggccagcggatgatc
gtcgcccggctcatccgcgagctggcggacgacgacgcggccgagcgctcgatgctcgtc
gtcgagcacgacctcgccatcctggacctgctcgccgataccctccacgtcgcgtacggg
gagcccggcgcgtacggtgtcgtcactgaccccaagtcggtccgaaacgggatcaacgag
tacctgaagggatacctcgacaacgagaatatgcggattcggccgtccgcgatcaccttc
gaggagcacgccccacgggtctcttcgcggagcgagacgctgatcgagtaccccgaactc
tcgaagtcgtacggcgacggcgagttcgaactccacgtcgagggcggcgagatcaaccgc
tccgaggtgctcggcgtcgtcggcccgaacgggatcgggaagtcgacgcttgcgaagctg
ttcgcgggctcgttggaaccggacgagggggaactcgactttgcactcgacatcgcgtac
aagccgcagtacatcgatattgaccagccgatgcgcgtcgacgtgttcctctcctcgatc
accgacgacttcggtagctcctactggaacacggagatcgcccagccgctccaactcgat
cgcgtgatggagcagaacctctcggacctgtcgggcggggagcgccagcgcgtcgccatc
gcggcgtgtctctccgaagacgccgatctgtaccttctcgacgagccctctgcgcacctc
gacgtggaacagcgggtgcgcgcgacgacggcgatccgccggtacgcggagaaccacgac
gcgaccgtgatggtgatcgaccacgacatctacatgatcgatctcctcgcagaccgcctg
atggtgttcgacggcgaaccggccgagcgcgggcacgccacgccgccgcaggagatgcgc
gacgggatgaacgagttcctcgcggacctggacatcaccttccgacgcgacgagcggacg
ggccgtccccggatcaacaagccgggctcgcagctcgacagctcacagaagcgcgacggc
gagtactactactcggggtag
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