Halorubrum lacusprofundi: Hlac_0572
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Entry
Hlac_0572 CDS
T00856
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_0572
Enzymes [BR:
hla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Hlac_0572
Transfer RNA biogenesis [BR:
hla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hlac_0572
Prokaryotic type
Hlac_0572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACM56174
UniProt:
B9LTP0
LinkDB
All DBs
Position
1:complement(588961..590412)
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AA seq
483 aa
AA seq
DB search
MAPSIPLREAHPAERAAGIDHYVSDADGIGGRLRESPDDFRVRELEAFEPEPLGADTGSY
PELVVRVTLRDWDTNDFARRISDALGISRERVSWAGTKDKRAVTTQLFTLREVDPDDLPE
IRGAEIEPLGRAGRRLSFGDLAGNAFEIRVADTVPEAPERVADVVGDLRAFGGDAEEAKD
DATVGVPNYFGQQRFGSRRPVTHRVGLAVVRDDFREAVRLYAGNSSDTEPDDTRAARDRV
DAAFGVGGDDTGDGSDPSADGTGDGDWETCLDAIPGKLRFERSMVHRLAERDVAPDAPPD
HEDWRHALEAVPSNLQRLFVNAAQSFLFNQVLSERLRRGLSFDRPVAGDVVCFADGDAPE
ELYAPDTDRLQRVDEDRVAVVTRHCERGRAFVTAPLIGTETDLGDGEPGEIEREVLADAG
IEPGDFALPGDFDSSGTRRAILLRSDLNVTFDDGDPRFAFALPSGSYATVLLREFTKSGP
LDL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtccatccccctccgcgaggcgcacccggccgagcgcgccgcgggaatcgac
cactacgtcagcgacgccgacgggatcggtggccggctccgcgagtcgcccgacgacttc
cgcgtccgcgaactggaggcgttcgagccggagccgctcggcgcggacaccgggagctac
cccgaactcgtcgtccgcgtcaccctccgcgactgggacacgaacgacttcgcgcgccgg
atctccgacgccctcggtatcagccgcgagcgcgtgtcgtgggcggggacgaaggacaag
cgcgccgtcaccacgcagctgttcacgctccgcgaggtcgaccccgacgatctccccgag
atccgcggcgccgagatcgagcccctcggccgcgccggtcgcaggctctcgttcggcgac
ctcgcgggcaacgccttcgagatccgcgtcgccgatacggtccccgaggctcccgagcgc
gtcgccgacgtggtcggtgaccttcgggcgttcgggggcgacgcggaagaggcgaaagac
gacgccaccgtcggcgtccccaactacttcggccagcagcgcttcgggagtcggcggccc
gtcacccaccgcgtcgggctcgccgtcgtacgcgacgacttccgcgaggcggtgcggctg
tacgccggcaactcctcggatacggagcccgacgacacccgcgccgcgcgcgaccgggtg
gacgccgcgttcggggtcgggggggacgatacgggagacggctccgacccctccgccgac
ggcaccggcgacggcgactgggaaacctgcctcgacgcgatcccgggcaagctccggttc
gagcgctcgatggtccaccggctcgccgagcgggacgtggctcccgacgcgccgccggat
cacgaggactggcggcacgcgctggaggcggtcccctcgaacctccagcgactcttcgtc
aacgccgctcagtcgttcctgttcaatcaggtgctgagcgagcgcctgcgccgcggcctc
tcgtttgaccgacccgtcgccggcgacgtggtgtgtttcgccgacggcgacgctcccgag
gagctgtacgcgcccgacacggaccggctccaacgggtcgacgaggacagagttgccgtc
gtcacccgccactgcgagcgcggtcgggcgttcgtcaccgcccccctcatcggcacggag
acggacctcggagacggtgagcccggcgagatagagcgcgaggttctcgccgacgccggg
atcgagcccggcgacttcgcgctccccggcgactttgactcgtcgggtactcggcgggcg
atcctgctccgaagcgacctcaacgtgacgttcgacgacggcgatccacggttcgcgttc
gcgcttccgagcggatcgtacgcgacggtgctcctccgggagttcacgaagagcggcccg
ctcgacctctga
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