Halorubrum lacusprofundi: Hlac_1495
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Entry
Hlac_1495 CDS
T00856
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_1495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_1495
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hlac_1495
Prokaryotic type
Archaeal type
TFB
Hlac_1495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
DUF5817
Trm112p
Cyclin_C
DUF5816
Ribosomal_S27e
Zn_ribbon_3
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ACM57083
UniProt:
B9LNZ5
LinkDB
All DBs
Position
1:1502266..1503219
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AA seq
317 aa
AA seq
DB search
MERPSRQRQQERETERESDEETLSCPECDSTEIVTDADQELVCEDCGLVLDERNIDRGPE
WRAFNHSERQSKSRVGAPITETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVSTA
ALYAACRQEGIPRSLDEVADVSRVPQKEIGRTYRYISQELGLELKPVDPKQFVPRFASAL
QLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGFR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagccgccaacgccaacaagagcgggagaccgagcgagagtcggacgaa
gaaacgctctcctgtccggagtgcgattcgaccgagattgtcaccgacgccgaccaagaa
ctcgtctgcgaggactgcggcctggtgctggacgaacggaacatcgaccgcgggccggag
tggcgcgcgttcaaccactcggagcggcagtcgaagtcgcgcgtcggcgccccgattacc
gagacgatgcacgacaaggggctgacgacgacgatcgactggaaggacaaggacgcatac
gggcggtcactctcctcggagaagcggtcgcagatgcaccggctgcgcaagtggcaggag
cgcatccggacgaaggacgcgggcgaacgcaatctccagttcgcgctctctgagatcgac
cggatggccagcgcgctgggcgtcccgcgatcggtacgcgaagtcgcctccgtcatttat
cgacgcgcgctgaacgaggacctgatccgcgggcggtcgatcgagggcgtctccaccgct
gccctctacgccgcctgccggcaggaggggatcccgcggtcgctcgacgaggtcgccgac
gtgtcgcgtgtcccgcaaaaggagatcgggcgcacgtaccgctatatctcacaggaactc
ggcttagagctgaagccggtcgacccgaaacagttcgttccgcggttcgcgtcggcgctc
cagctcagcgaggaggtccagtcgaaggcgacggagatcatcgatgtctccgccgagcag
gggcttctctccgggaagtcacccacgggattcgccgcggccgccatctacgccgcctcc
ctcctctgtaacgagaagaagacccagcgcgaggtcgccgacgtcgcgcaggtcaccgag
gtcaccatccgcaaccggtatcaggagcagatcgaagcgatgggattccgctag
DBGET
integrated database retrieval system
