Halorubrum lacusprofundi: Hlac_1513
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Entry
Hlac_1513 CDS
T00856
Name
(GenBank) Zinc finger TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_1513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_1513
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hlac_1513
Prokaryotic type
Archaeal type
TFB
Hlac_1513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Cyclin_C
A2L_zn_ribbon
Anti-TRAP
Zn_ribbon_LysW
Sigma70_r4
DZR_2
Cas12f1-like_TNB
Auto_anti-p27
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
ACM57101
UniProt:
B9LP13
LinkDB
All DBs
Position
1:1526720..1527721
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AA seq
333 aa
AA seq
DB search
MTETHIRGYNGETERDRSTESTESTAEEAESTEERTTTCPECEGNLITDTEHGETVCSEC
GLVVEQDSVDRGPEWRAFDSSERDSKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGKSLSS
RQRQRMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALSE
NLLPGRSIEGVATAALYAAARQAGNPRSLDEISAVSRVDKMELTRTYRYVIRELKLEIQP
ADPGSYVPRFVSRLGLSEETQRVARELLDSAKRAGITSGKSPVGLAASAVYAAALLSNEK
VTQSQVSEVADISEVTIRNRYKELLDASEGLTA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacacacatacgcggctacaacggcgagacggagcgagaccggagcacagag
tcgactgaatcgacggctgaggaggcggaatcgacggaagaacggactacgacttgtccg
gaatgcgagggcaacctcataaccgacacggaacacggcgagacggtctgttccgagtgc
gggctcgtcgtcgaacaggactcggtcgaccgcgggccggagtggcgcgccttcgactcc
agcgagcgcgacagcaagtcccgcgtgggggccccgacgacgaacatgatgcacgacaag
gggctctcgacgaacatcggctggcaggacaaagacgcctacgggaagtcgttgtctagt
cgtcagcgccagcggatgcaacggctgcgcacctggaacgagcggttccgcactcgcgac
tccaaagagcggaacctcaagcaggcactcggcgagatagaccggatggccagcgcgctc
ggcctccccgacaacgtccgcgagaccgcctcggtcatctatcgtcgcgcactgagcgag
aatctcctgccggggcgctccattgagggcgttgcaaccgcagcgctgtacgccgccgcc
agacaggcggggaacccgcggagtctcgacgagatatcggcggtctctcgggtcgacaag
atggagctcacccggacgtaccgatacgtgatccgcgagctcaaactggagattcagccc
gcagaccccggaagctacgtcccccggttcgtctcgcgcctcggcctctccgaggaaaca
cagcgggtcgcccgcgaactgctcgacagtgccaaacgcgccgggatcaccagcgggaaa
tcgccggtcggactcgcagcctctgcggtgtacgcggctgcactcctctcgaacgagaag
gtaacccagagccaggtgtcggaggttgccgacatctccgaagttaccatccggaaccgg
tacaaggaactcctcgatgcgagtgaaggactgaccgcctaa
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