Halorubrum lacusprofundi: Hlac_1535
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Entry
Hlac_1535 CDS
T00856
Name
(GenBank) type III restriction protein res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
hla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_1535
09124 Replication and repair
03420 Nucleotide excision repair
Hlac_1535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_1535
03400 DNA repair and recombination proteins [BR:
hla03400
]
Hlac_1535
Enzymes [BR:
hla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hlac_1535
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Hlac_1535
DNA repair and recombination proteins [BR:
hla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Hlac_1535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
SNF2-rel_dom
Helicase_C
DEAD
TrmB
HTH_IclR
MarR_2
AAA
HTH_20
DUF4283
DUF7342
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACM57123
UniProt:
B9LP35
LinkDB
All DBs
Position
1:1555292..1557268
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AA seq
658 aa
AA seq
DB search
MTDDSGDPAAGDASDSDTGDAPDSAAGNDSRADPDSQDNDAAEELSLDRFHEALEAEERP
VATASEVARRLGTTQAAARDALAALVDRGDVDRLDVESDPIVFYPTDWGRLATRERVVAF
PSRREIVVDRPTQFTRARLSQFAHLVDTTGTEPGTRGYLYRIRQEDVWAAPFEDADGLIA
SLRSVLPRRFDHLEDWIRDQWRRAHRFRLYTHEDGYVVLQAASESLMGNVADQHLDDDHL
RAPISETEAWVNEDAVAAVKRALYDAGYPVEDDRDLDVGDPVDIDLTTDLRSYQETWVET
FLDARSGVYVGPPGSGKTVAAIATIAAIGGETLILVPSRELAGQWREELLEHSTVDPADI
GLYHGGQKEIRPVTIATYQIAGMDRHRALFDSRKWGLICFDEAHHITAPIFSRSAELQAK
HRLGLSATPVRETGSEEEIYTLIGRPIGADWDELFEAGFVQEPEVEIRYVPWRDEMARNE
YASADGRERRRLAAENPAKIEEIRYLLAAHRDKKALVFIEYLDQGEAIADALGVPFISGE
TPHHERAELFRRFREEGTEGGEREGIGADGDDVDTLVVSRVGDEGIDLPNAELAIVASGL
GGSRRQGSQRAGRTMRPTGSALVYVLATRGSSEEEFAQRQMRHLARKGIRVRETNVAE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgactccggcgatcccgccgccggcgatgcttccgattctgacaccggcgac
gcccccgattccgctgctggcaacgactccagagcggaccccgattctcaggataacgac
gccgccgaagagctctcgctcgaccgcttccacgaggcgttagaggccgaggaacgaccc
gtcgcgaccgcgagcgaggtcgcgagacggctcggtaccacgcaggcggccgcgcgcgac
gccctcgctgcgctcgtcgaccgcggcgacgtggaccggcttgacgtcgagagcgatccc
atcgtcttctacccgaccgactggggccggctggcgacccgcgagcgcgtcgtcgcgttt
ccgagccgccgagagatcgtggtcgaccgcccgacgcagttcacccgggcgcggctctcg
cagttcgcgcacctcgtcgacaccaccggcaccgagcccggcacgcgcgggtacctttat
cggatccgccaggaggacgtgtgggccgcgccgttcgaggacgccgacggcctgatcgcg
agcctccgctcggtgcttcctcgccggttcgaccacctcgaagactggatccgcgaccag
tggcgccgggcgcaccgcttccggttatatacccacgaggacggctacgtcgtcctgcag
gccgcctccgagagcctgatgggcaacgtcgcggaccagcacctcgacgacgatcacctc
cgggcacccatctccgagacggaggcgtgggtcaacgaggacgccgtcgccgcggtgaaa
cgcgccctctacgacgccggctacccggtcgaggacgaccgcgacctcgacgtgggcgac
ccggtcgatatcgacctgacaaccgatctccggtcgtatcaggagacgtgggtcgagacc
ttcctcgacgcgcgctccggagtgtacgtcggcccgccggggtccggcaagaccgtcgcc
gccatcgcgaccatcgcggcgatcggcggcgagacgctgattctcgtcccctcccgcgaa
ctcgccggccagtggcgcgaggaactgctcgaacactccacggtcgacccggccgacatc
ggactgtaccacggcggccaaaaggagatccgaccggtcacgatcgcgacctaccagatc
gccgggatggaccgccacagggccttgttcgactcccggaagtgggggttgatctgcttc
gacgaggctcatcatatcaccgcccccatattttcacggtctgcagagctgcaagcaaaa
caccgccttggcctctcggccacgccggtccgtgagaccggcagcgaagaggagatatac
accctgatcggtcggccgatcggtgccgactgggacgagctgttcgaggccggcttcgtt
caggagccggaggtcgagattcggtacgtcccgtggcgcgacgagatggcccgcaacgag
tacgccagcgccgacgggcgggagcgacgacgcctcgccgcagagaaccccgcgaagatc
gaggagatccggtacctgctcgccgctcaccgcgacaagaaggcgctcgtgttcatcgaa
tacctcgatcagggcgaggcgatcgccgatgcgctcggcgtcccgtttataagcggcgag
acgccccaccacgagcgggcggagctgttccggcgattccgcgaggagggcacggagggc
ggagaacgcgagggaatcggtgcagacggagacgacgtcgacaccctcgtcgtctcccgt
gtcggtgacgagggaatcgatctcccgaacgccgaactcgcgatcgtcgccagcgggctc
ggcggctcgcgccggcagggctctcaacgggcgggccgcaccatgcgaccgaccggctcc
gcgctcgtgtacgtcctcgcgacccgcggatcgagcgaggaggagttcgcccagcgacag
atgcgccacctcgcgcgcaaggggatccgggttcgggagacgaacgtcgcggagtga
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