Halorubrum lacusprofundi: Hlac_1708
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Entry
Hlac_1708 CDS
T00856
Name
(GenBank) Transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_1708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_1708
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Hlac_1708
Prokaryotic type
Archaeal type
TFE
Hlac_1708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DNA_ligase_ZBD
DUF7129
zf-Mss51
Zn_ribbon_6
Zn_ribbon_3
Zn_ribbon_8
HypA
GntR
Motif
Other DBs
NCBI-ProteinID:
ACM57291
UniProt:
B9LPK3
LinkDB
All DBs
Position
1:1726288..1726812
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AA seq
174 aa
AA seq
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MAFEDLLNDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFHYDNIPENLEEEMYRLLDALEEREEYERTHEFYLCE
VCSIRFEFGEAMDFGFECPECGSPVEAMDNDRLREAMGQRVEKLRNELNVDVTG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggatctactgaacgaccccgtcatccagaagtacctccacgagctggtg
gggccgacggggatgccggtcgcggccgcaccgcccgacggtgaggtcaccgatgaagag
ctggcggaggagctcgggttggagctcaacgacgtccgacgcgcgctgttcatcctgtac
gagaacgacctcgccacctaccgtcgggtgcgcgatgaggactcggggtggctcacgtac
ctctggacgttccactacgacaacatcccggagaatctcgaagaggagatgtaccgcctg
ctcgacgccttagaggagcgcgaggagtacgagcgcacccacgagttttacctctgtgag
gtgtgttcgatccgcttcgagttcggcgaggcaatggacttcggcttcgagtgccccgag
tgcggctctccggtcgaggcgatggacaacgaccggctccgcgaggcgatggggcagcgc
gtcgagaagctccgtaacgagctcaacgtggacgtgacgggctaa
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