Halorubrum lacusprofundi: Hlac_1716
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Entry
Hlac_1716 CDS
T00856
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hla
Halorubrum lacusprofundi
Pathway
hla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Hlac_1716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hla03019
]
Hlac_1716
03009 Ribosome biogenesis [BR:
hla03009
]
Hlac_1716
04131 Membrane trafficking [BR:
hla04131
]
Hlac_1716
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hla04147
]
Hlac_1716
Messenger RNA biogenesis [BR:
hla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Hlac_1716
Ribosome biogenesis [BR:
hla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Hlac_1716
Membrane trafficking [BR:
hla04131
]
SNARE
SNARE associated proteins
Others
Hlac_1716
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Hlac_1716
Exosome [BR:
hla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hlac_1716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_28
AAA_7
Mg_chelatase
ABC_tran
Sigma54_activat
AAA_18
ATPase
AAA_3
AAA_17
DUF815
Parvo_NS1
AAA_24
NB-ARC
Vps4_C
AAA_lid_PRS2_C
AAA_30
TsaE
AAA_11
SLFN-g3_helicase
NACHT
ResIII
PhoH
IPT
Zot
Motif
Other DBs
NCBI-ProteinID:
ACM57299
UniProt:
B9LPL1
LinkDB
All DBs
Position
1:1730790..1733012
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRVDGFTRQNADVGIGERVTIRKAEAEKAEKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVDTEPDGVCLITEDTEVELREEPISGFE
KTGSGITYEDIGGLQSEIQRVREMVELPMKHPQIFSKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDEV
GRKEILQIHTRGMPLSDDVSLDHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDDE
EVPPSLIDRMIVKRDDFGAALNEVEPSAMREVLVELPKISWDDVGGLSEAQQQVQESVEW
PLSSPEKFDRMGVDPPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPSRGQEMGNNVSERVVNQLLTELDGLEEMGDV
MVIGATNRPDMIDPALLRSGRFDRLVMIGQPDQEGRERILEIHTQDTPLAPDVTLREIAE
ITDGYVGSDLEGIAREAAIEALRDDDDAEEVEMKHFRRALESVRPTINDDILAYYEEVEE
QFKGGSGNAIRDTGGKIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaagtggcgaaagcgtacccgaacgactcgggtcgcggcatc
gcccgactcgaccccgatacgctgttgcacctcaagctctcgcccggcgacatcatcgag
atcgagggcgcggagacgaccgccgccaaggtctggcgcgccgaccgccaggactggaac
acggacacggtccgcgtcgacggcttcacccgtcagaacgccgacgtgggcatcggcgag
cgcgtgacgatccggaaggcggaggccgaaaaagccgagaagctcgtcttggctccgccc
gaggaggcgtccgtccagttcggctccgacgccgctggcatggtgaaacgccagatcctc
aagcggccggtcgtcgagcgcgacatcgttcccgtgatgtcgtcgacgaaccacccgttc
atgcgatcgcccggacaggcgatcccgctaatcgcggtcgacaccgagcccgacggcgtc
tgtctgatcaccgaggacaccgaagtcgaactgcgcgaggagccgatctccgggttcgag
aagaccggcagcggtatcacctacgaggatatcggcgggctccagtcggagatccagcgc
gtccgcgagatggtcgagctgccgatgaaacacccgcagatcttctcgaagctcgggatc
gagccgccgcagggcgtcctcctgcacggcccgccgggcacggggaagaccctgctcgcg
aaggcggtcgccaacgagacgagcgcgtcgttcttctcgatcgccggcccggagatcatc
tcgaagtactacggcgagtccgaacagcagctccgagagatcttcgaggacgcgaaagag
gagagcccgagcatcatcttcatcgacgagctcgactcgatcgcgccgaagcgcgaggac
gtgaccggcgaggttgagcgccgcgtcgtcgcgcagctgttgacgatgatggacggcctc
gaaacgcgcggacaggtggtcgtcatcggcgcgacgaaccgcgtcgacagcgtcgatccc
gcactccggcgccccgggcgcttcgaccgcgagatagagatcggcgtccccgacgaggtg
ggtcgcaaggagatcctccagatccacacccgcgggatgccgctctcggacgacgtctct
ctcgatcacctcgccgacgagacgcacgggttcgtcggcgccgacatcgagagcctcacg
aaggaggccgcgatgaaggcgcttcggcggtacctccccgagatcgacttagacgacgag
gaggtcccgccgagcctcatcgaccggatgatcgtcaagcgcgacgacttcggtgccgcg
ttaaatgaggtggagccctccgcgatgcgcgaggtcctcgtcgagctcccgaagatatcg
tgggacgacgtcggtgggctcagtgaggcccaacagcaggttcaagaatccgtagagtgg
ccgctcagctcgccggagaagttcgaccggatgggcgtcgaccccccgaagggcgtgctg
ctgtacggcccgcccggcaccgggaagacgctgatggcgaaggcggtcgccaacgagacg
aacgcgaacttcatctcggtcagggggccacagctgctctcgaagtgggtcggcgagtcg
gagaaggcgatccggcagaccttccggaaggcccggcaggtgagcccgaccatcatcttc
ttcgacgagctggacagcctcgcgccttcgcgcgggcaggagatggggaacaacgtctcc
gagcgcgtcgtcaaccagctgctgacggagctcgacgggttagaggagatgggcgacgtg
atggtgatcggcgccaccaaccgtcccgacatgatcgaccccgcgctgctgcgctccggc
cggttcgaccggctcgtcatgatcggacagcccgaccaggagggccgcgagcggatcctc
gagatccacacgcaggacacgccgctcgcacccgacgtgaccctccgcgagatcgccgaa
atcaccgacggctacgtcggctccgatctggagggcatcgcccgcgaggccgccatcgag
gcgctgcgcgacgacgacgacgccgaggaggtcgagatgaagcacttccggcgcgcgctg
gagtcggtgcgccccacgatcaacgacgacatcctcgcgtactacgaggaggtcgaagag
cagttcaagggcggcagcggcaacgcgatccgcgacaccggcggcaagatcgggttccaa
taa
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