Halorubrum lacusprofundi: Hlac_1812
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Entry
Hlac_1812 CDS
T00856
Name
(GenBank) pseudouridylate synthase TruB domain protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_1812
Enzymes [BR:
hla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hlac_1812
Transfer RNA biogenesis [BR:
hla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hlac_1812
Prokaryotic type
Hlac_1812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
Pus10_C
PUA
Motif
Other DBs
NCBI-ProteinID:
ACM57391
UniProt:
B9LPV3
LinkDB
All DBs
Position
1:complement(1828587..1829618)
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AA seq
343 aa
AA seq
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MTRHSDDTDANTGADTGRDADADADGDAVDPLRSPPDQRSVPELLRFGVVNVDKPAGPSS
HQLSAWVRDAINETLATLDPDGSPIHGVAHAGTLDPKVTGCLPTLTGDATRAAQVFLEGS
KEYVSVLELHGSPPADFRDVVAEFEAEIYQKPPRKSAVTRRLRTRTIYDLDVLEVDDRQA
LLRIRCESGTYIRKLCHDIGLATGVGAHMGHLRRTATDPFDDRDLHPLQDLVDGLTWAEE
GDDAFLREVVRPAEDALVHLPSVTIAPSAARNVATGAPVYAPGVIDVDSVSEGGEGDDGD
DTDRDPPLVACHTPDGAAVCLGRLVGDPDAESGVVVSLERVLV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacccgacactcagacgataccgatgcgaacacgggggcggacaccgggcgggacgcc
gacgcggatgccgacggtgacgccgtcgaccccctcagatccccgccggaccagcgctcc
gtcccggaactgctccggttcggcgtcgtcaacgtcgacaagcccgccggtccctcctcc
caccagctctccgcgtgggtgcgcgacgcgatcaacgagacgctggcgacgctggatccg
gacgggtccccgatccacggggtcgcgcacgcggggacgctcgaccccaaggtcaccggc
tgtctcccgacgctgaccggcgacgcgacccgggccgcacaggtcttcttggagggaagc
aaggagtacgtctcggtgctggagcttcacgggtcgcctcccgcggacttccgcgacgtg
gtcgccgaattcgaggcggagatctaccagaagccgccgcgcaagagcgcggtgacccgc
cggctccgaacccgtacgatctacgatctcgacgtgctggaggtcgacgaccgacaggcg
ctcctccggatccggtgtgagtccgggacgtacatccggaagctgtgtcacgacatcggc
ctcgcgacgggcgtcggcgcgcacatgggccatctccgccgcaccgccaccgacccgttc
gacgaccgcgacctgcaccccttacaggacctcgtcgacgggctcacgtgggccgaggag
ggcgacgacgcgttcctccgcgaggtcgtccgccccgccgaggacgcgctggtccatctc
ccgtcggtgacgatcgctccctccgccgcgcgcaatgtggccaccggcgcgcccgtctac
gcccccggcgtcatcgacgtggactcggtgtcggaaggcggggagggagacgacggggac
gacaccgatcgcgaccccccgctcgtcgcctgccacacccctgacggcgccgcggtctgt
ctcgggcgactggtcggcgaccccgacgccgagtcgggagtcgtcgtgtcgctggagcgc
gtcctcgtctga
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