Halorubrum lacusprofundi: Hlac_1937
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Entry
Hlac_1937 CDS
T00856
Name
(GenBank) conserved hypothetical protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_1937
Enzymes [BR:
hla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hlac_1937
Transfer RNA biogenesis [BR:
hla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hlac_1937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
DnaJ_CXXCXGXG
Anti-TRAP
THUMP
Motif
Other DBs
NCBI-ProteinID:
ACM57515
UniProt:
B9LQ94
LinkDB
All DBs
Position
1:1937122..1938405
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AA seq
427 aa
AA seq
DB search
MDVLEVAARATGTGPVCDACLGRLVADRSFGLSNAERGSALRTSLALRDDEDYEPVETAD
CWVCEGRCTEFDEWAERAAEAVEDVEFATYNVGTRPPPLIEENEALLREEAGLDDDAGEP
FKSEFNREVGKRFGRLTETEVSFDRPDVQFTIDLAEDEIDAKVNSTFVYGRYRKLERDIP
QTEWPCRECKGSGRQGADPCDHCGGSGYLYDDSVEEYTAPVVEDVMDGTEATFHGAGRED
VDALMLGTGRPFVIEVEEPRRRRVDTDRLQADINAFADGAVEVEGLRLATYDMVERVKEH
DAAKRYRAEVAFDADVDADALAAAVEELEGTTVEQYTPNRVDHRRASITRERDVYEATAE
LDDARHAIVEIHGEGGLYIKELISGDEGRTEPSLAGLLGVGAEVTALDVVAVEGEDEPFE
REEFFRE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggacgtactcgaggtcgcggcgcgggcgaccgggacggggccggtgtgcgacgcgtgt
ctcggccggctcgtcgccgaccggagcttcgggctgtcgaacgccgagcgcgggtcggcg
ctgcggaccagtcttgcgctccgcgacgacgaggactacgagccggtcgagacggcagac
tgctgggtgtgtgaggggcgctgcaccgagttcgacgaatgggccgagcgggccgccgag
gcggttgaggacgtggagttcgccacctacaacgtcggcacccgtcccccgccgctgatc
gaggagaacgaggcgctgctccgcgaggaagccgggctcgacgacgacgcgggcgagccg
ttcaagtcggagttcaaccgcgaagtcgggaagcggttcggccggctcacggagacggag
gtgtcgttcgaccgcccggacgtgcagttcacgatcgacctcgccgaagacgagatcgac
gcgaaggtgaactccacgtttgtgtacggccggtatcgaaaactggaacgggacatcccg
cagaccgagtggccctgccgcgagtgcaagggctcggggcgacagggcgcggacccctgt
gatcactgtggcggctccggctacctctacgacgacagcgtcgaggagtacaccgcgccc
gtcgtcgaggacgtgatggacggcaccgaggcgacgttccacggcgcgggccgggaggac
gtggacgccttgatgctcggaaccgggcgcccgttcgtgatcgaagtcgaggagccgcgc
cgccgccgggtcgacaccgatcgcctgcaggccgacatcaacgccttcgccgacggcgcc
gtggaggtcgaggggctccggctcgcgacctacgacatggtcgaacgcgtgaaggaacac
gacgctgcgaagcgctaccgcgccgaggtagccttcgacgccgacgtggacgccgacgcc
ctcgcggccgcggtcgaagagcttgaggggacgactgtcgagcagtacaccccgaaccgg
gtcgaccaccgccgggcgagcatcacccgcgagcgcgacgtgtacgaggcgaccgccgaa
ctcgacgacgcccgccacgcgatcgtggagattcacggcgaaggtgggctctacatcaaa
gagctgatctccggcgacgagggccggacggagccgagcctcgcaggcctgctcggcgtc
ggcgccgaggtcaccgcgctcgacgtggtcgccgtcgagggcgaagacgagccgttcgag
cgcgaggagttcttccgggagtga
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