Halorubrum lacusprofundi: Hlac_2070
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Entry
Hlac_2070 CDS
T00856
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_2070
Enzymes [BR:
hla01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Hlac_2070
Transfer RNA biogenesis [BR:
hla03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Hlac_2070
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
ACM57648
UniProt:
B9LQZ4
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All DBs
Position
1:2059214..2060416
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AA seq
400 aa
AA seq
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MDMQPTGHLRGDAVHVAGDARQRFHDSNGYGRPLGGNEIALSRVETAHLLFRGDLSGVSL
TPDADPVGFERFFVESAAAADRFAVRYLVYADLRDRGFYLSPAREPWPGGDVDAPDAVDF
VAYERGSTPDTGDVKYPVQVVGERESLPAAGLAGRTLAVVDEESDITYFAATRGEIAGAT
DYEPPDQLDGVLLSDRVVVWDAPEGLYERGFYGQPLTGRAAAVEGAVQLSLVEAASLAAD
GVLSLSTSVGTAGESPSEGAAETDGPVAAVVARGRDVEGERFDRRLAVYKRLRAADAVPK
TGFKFGADFRTYLDVETVEDLPHSEHLVRVVEGDHRFSPRELSLDVRLAGGVRKEMVFAL
TMVEGDGSGAGGDGGDDETAENGAVRDADVEWLSIGRLTP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcaaccgacagggcacctgcgcggcgacgcggtccacgtcgccggcgacgcc
cgccagcggttccacgactccaacggctacggccgtccgctcggcggcaacgagatcgcg
ctctcgcgggtcgagaccgctcacctgctgttccggggcgacctctcgggagtctccctc
acccccgacgccgaccccgtcggcttcgagcgcttcttcgtcgagtccgcggccgccgcc
gaccgcttcgcggtacgctacctcgtttacgccgacctgcgcgaccgcggcttctacctc
tcgcccgcccgcgagccgtggcccggcggcgacgtcgacgcgcccgacgcggtcgacttc
gtcgcctacgagcgcggttcgacgcccgacacgggggacgtgaagtaccccgtacaggtc
gtcggcgagcgcgagtcgctgccggcggccgggctcgcgggacgcaccctcgccgtcgtc
gacgaggagtccgacatcacgtacttcgcggcgacgcgcggggagatcgcgggtgcgacc
gactacgagcccccggaccagctcgacggcgtcctgctctccgaccgcgtcgtcgtctgg
gacgcccccgaagggctctacgagcgcggcttctacggccagccgctcaccggccgcgcc
gcggcggtcgagggcgcggtccagctatccttagtcgaggccgcgtcgctcgccgccgac
ggcgtcctctcgctgtcgacgtcggtggggacggcgggcgaatcccccagcgagggcgcc
gcagagacggacggtcccgtcgccgcagtcgtcgcccgcggccgcgacgtggagggcgag
cggttcgaccgccggctcgccgtttataagcgcctccgcgcggccgacgccgtgccgaag
accggcttcaagttcggcgcagacttccggacgtacctcgacgtggagacggtcgaggac
ctgccgcactccgagcacctcgtgcgcgtcgtcgagggcgaccaccgattctccccgcgc
gagctctcgctcgacgtgcggctcgcgggcggcgtccgcaaggagatggtgttcgcgctg
acgatggtggagggtgacggtagcggcgccggtggcgacggcggcgacgacgagaccgcc
gagaacggcgcggtccgcgacgccgacgtggagtggctctcgatcgggcgactgacgccc
tga
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