Halorubrum lacusprofundi: Hlac_2395
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Entry
Hlac_2395 CDS
T00856
Name
(GenBank) DNA-directed RNA polymerase subunit E, RpoE2
KO
K15171
transcription elongation factor SPT4
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Hlac_2395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_2395
03019 Messenger RNA biogenesis [BR:
hla03019
]
Hlac_2395
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Hlac_2395
RNA polymerase I system
Hlac_2395
Messenger RNA biogenesis [BR:
hla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Hlac_2395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Zn_Ribbon_1
DZR
Zn_ribbon_3
DUF8135
Zn_ribbon_15
HypA
Zn_ribbon_NOB1
Zn_ribbon_RanBP
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ACM57970
UniProt:
B9LSM3
LinkDB
All DBs
Position
1:complement(2388452..2388649)
Genome browser
AA seq
65 aa
AA seq
DB search
MAEDRLACRECHHVNDPDSQTCEHCGSSSLTEDWAGYVIITQPEESQIAEEMNVTKAGSY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaccgcctggcgtgccgtgagtgccaccacgtcaacgacccggactcccag
acgtgcgagcactgcgggtcgtcgtcgctcaccgaggactgggcgggctacgtcatcatc
acccagcccgaggagagtcagattgcggaggagatgaacgtcacgaaggccgggtcgtac
gcgctgaaggtccggtag
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integrated database retrieval system
