Halorubrum lacusprofundi: Hlac_2552
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Entry
Hlac_2552 CDS
T00856
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03410
Base excision repair
hla03430
Mismatch repair
hla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hlac_2552
03430 Mismatch repair
Hlac_2552
03440 Homologous recombination
Hlac_2552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hla03400
]
Hlac_2552
DNA repair and recombination proteins [BR:
hla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Hlac_2552
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hlac_2552
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hlac_2552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF6003
Motif
Other DBs
NCBI-ProteinID:
ACM58124
UniProt:
B9LTF2
LinkDB
All DBs
Position
1:2528677..2530098
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AA seq
473 aa
AA seq
DB search
MAVADPPVPELTARANACAGRLRAADRVLLASHIDADGLTSGAVASTALARAGIDHEVVF
EKQLDAESIAGIAAREFDVVLFTDFGSGQLDVIVGHEDRGDFVPVIADHHQPADRDTDFH
LNPLLEGLNGASELSGAGASYVLARALEGPDGDNRDLAALAVVGAVGDMQDSDGGLIGAN
EAIVADGVDAGVIETRTDLDLYGRQTRPLPKLLEYASDVKIPGVSNDEAGAISFLTDLDI
EVKRDGEWRRWVDLDAGERQILASGLMRRAVASGVPADRIEALVGTSYTLVDEEPGTELR
DVSEFSTLLNATARYERADVGLAVCLGDRGDALSEARRLLRNHRKNLSEGLQWVKSEGVT
EEQHLQWFDAGSRIRETIVGIVAGMAIGSPALDRSKPVIAFAEESAEELKVSSRGSHSLV
RQGLDLSAVMREASQAVGGDGGGHDVAAGATIPIGERDAFVAEADRLIGEQLS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgccgatcctcccgtgccggagctcactgcgcgcgcgaacgcctgcgccggc
cggctccgcgcagcggaccgcgtgctactcgcgtcccacatcgacgctgatgggcttacc
agcggcgcagtcgcctcgacggcgctcgcgcgggccgggatcgaccacgaggtcgtcttc
gaaaagcagctcgacgccgaatcgatcgcggggatcgccgcgcgtgagttcgacgtagtg
ctctttaccgacttcggctccggacagctcgacgtgatcgttggccacgaggatcgcggc
gacttcgtccccgtgatcgccgaccaccatcagccagccgaccgtgacacggatttccac
ctcaaccccctccttgaggggctaaacggcgcgagcgagctgtcgggcgcgggcgcgagc
tacgtgcttgcccgcgcgttggagggccccgacggcgacaaccgtgacctcgccgcactg
gcggtggtgggcgcggtcggcgacatgcaggactccgacggcgggctcatcggcgccaac
gaggcgatcgtcgccgacggcgttgacgccggcgtcatcgagacacggacggacttggac
ctgtacggcaggcagacgcgcccgctcccgaaacttcttgagtacgcctctgacgtgaag
atcccgggtgtctcgaacgacgaggcgggtgcgatctccttcctcaccgacctcgacatc
gaggtgaaacgcgacggagagtggcggcgttgggtcgacctcgatgcaggggagcgacag
attctcgcgtccggactgatgcgccgcgccgtcgcctccggcgtccccgccgaccggatc
gaggcgctcgtcggtacctcctacaccctcgtcgacgaggagcccggcacagagttgcgg
gacgtaagcgagttttccacgctcctcaacgccaccgcccggtatgaacgggccgacgtg
ggactcgcggtgtgtctcggcgaccggggtgacgcactctccgaggcgcgccggctcctc
cggaaccacagaaagaacctctctgaggggcttcagtgggtgaaaagcgagggcgtcact
gaggagcagcacctccagtggttcgacgctggctcgcggatccgcgagacgatcgtcggg
atcgtcgcggggatggcgatcggctcgccggcgctcgatcgctcgaagcccgtaatcgcg
ttcgccgaggagagcgccgaggagctgaaggtgtcctcgcggggatcacactccctggtt
cggcagggactcgacctctccgcagtgatgcgagaggcgagtcaggccgtcggcggcgac
ggcggcggtcacgacgtggccgcgggcgcgacgatcccgatcggcgagcgcgatgcgttc
gtcgccgaggcggaccggctgatcggcgaacagctctcgtag
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integrated database retrieval system
