Halorubrum lacusprofundi: Hlac_2724
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Entry
Hlac_2724 CDS
T00856
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_2724
Enzymes [BR:
hla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Hlac_2724
Transfer RNA biogenesis [BR:
hla03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Hlac_2724
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ACM58295
UniProt:
B9LUM8
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All DBs
Position
1:complement(2714694..2715266)
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AA seq
190 aa
AA seq
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MRAFFAVDLPDDLAPRVADAQAALGDAAGLALVDPEQTHVTLKFLGDIAEDNDDTTPTLD
DVIAAGKQAVETANVDPFECAVEGFGVFPSLDYISVVWAGVDAGSAELTALHEALEVETT
ALGVDPENHAFTPHVTLARMNDARGKELVQEAVRERDPEIGRFEVDAVRLVSSTLTSDGP
AYETVASFGL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgttcttcgccgtcgacctcccggacgacctcgcgcctcgcgtcgcggacgca
caggccgcgctcggggacgcagcgggactggcactcgtcgatcccgaacagacgcacgtc
acgctgaagttcttgggagatatcgccgaggacaacgacgacaccacacccacactcgac
gacgtgatcgccgccggcaaacaggcggtcgagaccgctaacgtcgaccccttcgagtgc
gccgtcgagggattcggcgtcttccccagcctcgactacatctcggtcgtctgggcgggg
gtcgacgccgggagcgcggaactgaccgcgctccacgaggccctcgaagtggagacgacc
gcgctcggcgtcgaccccgagaaccacgcattcaccccgcacgtcacgctcgcccggatg
aacgacgcccgcgggaaggaactcgtacaagaagccgtccgcgagcgcgacccggagatc
ggccggttcgaggtcgacgcggtccgactcgtctcgtcgacgctgacgagcgacgggccg
gcgtacgagaccgtcgcgtcgttcgggctctag
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