Halorubrum lacusprofundi: Hlac_2880
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Entry
Hlac_2880 CDS
T00856
Name
(GenBank) Zinc finger TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_2880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_2880
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hlac_2880
Prokaryotic type
Archaeal type
TFB
Hlac_2880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ACM58438
UniProt:
B9LW48
LinkDB
All DBs
Position
2:142368..143294
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AA seq
308 aa
AA seq
DB search
MATRDIYETGFDEDVQTNSSTNPCPECDGRVTTNAIETICEDCGLVIDEQRIDHGPEWRT
HDQDQRKRTGAPLTAARHDRGLSTEIGRGKDANGNNLSGQKHQRLSRMRREQSRGRFQSK
AERNLAHGLGEVRRISGALELSNSVRDQACQLFRSAQNENLLRGRSIEAIAAASVYGACR
CNGLSRLVGEVSEMARVVESRVTNAYKTLNEELGLPAKPVSPGKFVPRLASDLECPDEIR
QRARTLAEQAEESGLTAGVHPAGFAAACLYKAGEELGYWVTQSDVAETGNVTPTTVRTHH
ETLEERVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaactagagatatctacgaaacgggcttcgacgaggacgtccagacaaactccagc
acaaacccatgtccggagtgtgatggccgggtcactaccaacgcgatcgaaacgatctgt
gaggactgtggactcgttattgacgaacaacgaatcgatcacggtcctgaatggagaact
cacgatcaggaccagcgaaagcggacgggcgctccactgactgcggcacggcatgaccga
ggcctctcgacggagatcggtcgcgggaaagatgcgaacgggaacaacctctctgggcaa
aaacaccagcgactatcccgaatgcgacgagaacaaagtcgcggtcggttccagtcaaaa
gccgagcgaaacctcgcacacggcctaggcgaagttcgaaggatttcgggtgctctcgaa
ctctccaattcggtgcgcgatcaggcgtgtcagctgttccggagcgcacagaatgaaaat
ctgctgcgtggcagatccatcgaggcgatcgccgcagcgagcgtgtacggcgcgtgtcga
tgtaacggcctctcgcgattggtgggcgaggtcagcgagatggcccgcgtcgtggagtca
cgggtcacgaatgcgtacaaaacgctgaacgaagagctggggctccctgccaagcccgtc
tctcccggtaagttcgtgccacgcctcgcctcggacctcgaatgtccagacgagatccga
caacgggctcgaacacttgcagaacaggccgaagagagcggtctcacggcgggcgtccat
ccagccgggttcgcagcggcctgcctctacaaagcgggggaggaactggggtactgggtg
acgcaaagcgacgtcgcggagacaggaaacgtcacgccaaccacagttcggacgcatcac
gagacgttagaggagcgtgtagcctga
DBGET
integrated database retrieval system
