Halorubrum lacusprofundi: Hlac_3287
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Entry
Hlac_3287 CDS
T00856
Name
(GenBank) TATA-box binding family protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_3287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hla03000
]
Hlac_3287
03021 Transcription machinery [BR:
hla03021
]
Hlac_3287
Transcription factors [BR:
hla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Hlac_3287
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Hlac_3287
RNA polymerase III system
TFIIIB
Hlac_3287
RNA polymerase I system
SL1/TIF-1B
Hlac_3287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
ACM58813
UniProt:
B9LWH2
LinkDB
All DBs
Position
pHLAC01:28367..28912
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AA seq
181 aa
AA seq
DB search
MTVEIANIVGSGDLGVELDLEALEGDLSTPYLEYDPSNYHGLYVRLEEGGPLITVYRSGK
YIISGCPSEEVLRKTNDGFLRALAELGITDEAQQTGFTVQNVVCTAMLNEMVSLNALSIG
LGLEVTEYEPEQFPGLVYRPEGIGAVLLVFANGKLVITGAKDAETAEVAYNHLQSKVQEL
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcgaaattgcgaacatcgtcggctccggcgatcttggcgtggagctggatctc
gaagcattggaaggcgacttgtctacaccgtacttggagtacgacccgtcgaattaccac
ggtctttacgttcgtctcgaagaaggtgggccgctcatcacagtctatcggagcgggaag
tacatcatcagcggctgccccagtgaggaggtactacgcaagacgaacgatggattcctg
agagccctcgcagagttgggaatcaccgacgaagctcaacagaccgggttcactgtccag
aacgtggtctgtactgcgatgctcaatgagatggtttctctgaatgctctctcaatcggg
ttggggttggaagtaacggagtatgagccggagcagttcccgggtctggtttatcggccc
gagggcatcggtgctgtactactagtgttcgctaacgggaagctggtgattacaggtgcg
aaggatgccgagaccgccgaagtagcgtacaatcaccttcagtcgaaggtacaggaacta
gtgtag
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