Halorubrum lacusprofundi: Hlac_3413
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Entry
Hlac_3413 CDS
T00856
Name
(GenBank) TATA-box binding family protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_3413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hla03000
]
Hlac_3413
03021 Transcription machinery [BR:
hla03021
]
Hlac_3413
Transcription factors [BR:
hla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Hlac_3413
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Hlac_3413
RNA polymerase III system
TFIIIB
Hlac_3413
RNA polymerase I system
SL1/TIF-1B
Hlac_3413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF218
Motif
Other DBs
NCBI-ProteinID:
ACM58925
UniProt:
B9LWT4
LinkDB
All DBs
Position
pHLAC01:163314..163874
Genome browser
AA seq
186 aa
AA seq
DB search
MTAPTETIEIQNVVASTGIDQELDLETLVDDIPGAEFNPDNFPGLVDRTQDPKAAALIFR
SGKIVCTGAASVDDVHEALEIIFEKLRELGIPVTDSPEITVQNIVSSADLGYDLNLNALA
IGLGLEDVEYEPEQFPGLVYRMEDPGVVILLFGSGKIVITGGKFAEDATAAVENIVEKID
DLGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctacagagacaattgaaattcagaacgttgttgcatcaactggaatcgat
caggaacttgatctcgaaacacttgtcgacgatattcccggtgccgaattcaacccagac
aactttcctggactcgttgatcggacacaagatccaaaagctgcagcactgatttttcgc
tccgggaaaatcgtctgtaccggcgctgcaagtgttgatgatgtccacgaggccctcgag
ataatttttgagaagcttcgtgagttaggtatcccagtcactgactctccagagatcacc
gtccaaaacattgtttcgagtgcagacctcggttatgatcttaatttgaatgcactcgcg
atcgggcttgggttggaggatgttgagtatgaacccgaacagtttcctggactcgtctac
cgaatggaagatccaggggtcgtaatcctcctctttgggagcggtaaaatcgtaattacg
ggtggtaaatttgctgaggatgcgactgctgctgtagagaatattgttgagaaaatcgat
gatctcggtctactgggctaa
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