Halorubrum lacusprofundi: Hlac_3420
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Entry
Hlac_3420 CDS
T00856
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
hla
Halorubrum lacusprofundi
Pathway
hla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hlac_3420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hla03021
]
Hlac_3420
Transcription machinery [BR:
hla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hlac_3420
Prokaryotic type
Archaeal type
TFB
Hlac_3420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
RB_B
C1_1
DZR
Motif
Other DBs
NCBI-ProteinID:
ACM58932
UniProt:
B9LWU1
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All DBs
Position
pHLAC01:complement(169001..169930)
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AA seq
309 aa
AA seq
DB search
MATREIYGQTFDEDVSSDQSATCVECGGQIRTNSIETACEDCGLIIDEQRIDHGPDWRSY
NEKTDSQSRVGPPRTVARHDNGLSTEIGRWRDGNGNQLAGSKRSRLSRMRREHSRGRFGS
KSERNLAHGLGEVRRITSVLDLAESIRNQACQLFRSAQNEDLLRGRSIEAIAAGSVYSAC
RCNGLGRTIDEIAALARVNQQRVMNAYKVLNQELGLPTQPIRPSGFVPRLASELGVSDQV
RHRAQRLAEHSETVDKTVGVRPSGFAAACLYCASQEYGHPLTQRSAADAANVTPTTVRAH
RDTIEGLPL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagaaatctacggacaaacgttcgatgaggatgtatcgagtgatcaatct
gctacctgtgttgaatgcggtggtcagatacgcacaaacagcattgaaacggcctgcgag
gactgtggcctcattatcgatgaacagcggattgaccacggcccagactggcggagctac
aacgagaagacagactcacaaagtcgagtggggccaccgcgtacagtggcgcgtcacgac
aacggcttgtcgaccgagattggccgatggagagatggaaacggtaaccagctcgctgga
tcgaagcgcagtcgactctccaggatgcgccgggagcacagccgtggccgattcgggtcg
aaatcagaacggaaccttgcacacgggctcggtgaggtccgtcgaatcacgagtgtcctt
gatctcgctgagtcgatccgtaaccaagcctgtcagctcttccgaagtgctcaaaacgag
gatctccttcgcggtcggtcaatcgaagcgatagccgcaggaagtgtgtatagtgcttgc
cggtgcaacgggctcggacgaacaatcgacgagatcgcggcgttggcccgagtgaatcag
cagcgagtgatgaacgcgtacaaagtactgaaccaggaactcggactgcccacccaaccc
attcggccaagtgggttcgtcccacggcttgcatccgaactcggcgtttcggatcaggtt
cgacatcgagcccagcggttggcagaacactcggagacagtcgacaagactgtgggtgtc
cgtccttctgggttcgcagcagcgtgtctctactgtgctagtcaggaatacggacatccg
ctcacacaacggtcagccgccgatgctgcaaatgtgacgccaacaactgtccgagcacat
cgagatacgattgaaggactacctctctga
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integrated database retrieval system
