Halorubrum lacusprofundi: Hlac_3482
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Entry
Hlac_3482 CDS
T00856
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hla03000
]
Hlac_3482
Transcription factors [BR:
hla03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hlac_3482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
BAT
PAS_9
HTH_10
PAS_8
PAS_3
GAF
GAF_2
PAS_7
GAF_3
HTH_20
HTH_24
TrmB
HTH_IclR
Autoind_bind
Motif
Other DBs
NCBI-ProteinID:
ACM58992
UniProt:
B9LX01
LinkDB
All DBs
Position
pHLAC01:226640..229624
Genome browser
AA seq
994 aa
AA seq
DB search
MGDLTAALRETLDTFAPDGTPLTTSEVAEALDLGRRSTYDRLDRLVDADELRTKKVGASA
RVWWRNDTGDAALPDAKIADASTNGASTDAGAGAVENPPLVDVLESSPTGVAAFADDGTC
ATANEQFRTLFGLDGDVSLEALEAVPLTDHDGDVIGAADRPVRRVRRTNRPVVDEHVRVD
TDDGHRWVSMTVQESDDGVVVTASDVTGVVERSRRLRRERDAVAAELSEFASHAVDSRLK
LDEDGTVLSVDDRAAALLEPDVVELVGASTSEAFDALRGASAIVDAALESESKQTGDCRH
GDRDAWFEVEAVPTTSGASVLLREVTEQVEHERELQRYVGVVDALGEPVYELDSEGRFAF
VNDAITELSGYSREELLGEHVSLVIPDDAVDRIEPQISELLTEDAPDRVRSEYHVTTKRG
HAVPVENRLTVLTDEAGNVRGNAGFVSDITERKERERELERYERIVETVEDGIYVLDQED
RFVVVNDAFASMAGVDGEDIIGQKASIVFDETFAERVNDRNAALSADTLESAKFEETFAP
VDGDPLVVETRFTTFASKDGNTGRVGVVRDVGERVERERRIERQRARLEALNEVNAVVRD
VATGAIDGSTREEIETMVCKRLAASNAYEFAWIGEMTGVDGSLAVRTAAGLDDPDRASLS
GMLEGVRGRGAVSRAVRDRTAQTVQDASLLPTSDPWRALAARFGFRSAMAIPITHDGRMF
GVLNVHTDRESAFADEERRLVEHIGEVVGHAIAAVERKRALASEAVLELDYRVPRAFSSL
DVSESLSGTLTFDETVSTKGDEVLVYGTASPTAMESLASLVDEVPYWESVSVVDTDEAGN
SKFELHAKEPPVFSMVTARGGYVDEVVTVDGNSRFVLHVPPGQDVRAITEGVSAAYPSAE
LVAQRQISPSQPSMARLQDRIAEDLTDRQRAALYAAYHSGFFEWPRAATGEDVAESLGVA
PPTFNQHIRKAERKVFEALLGEGGEESSGWTDTE
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgggggacttgacggctgcactccgcgagacgctcgacacgttcgcgcccgacgggacg
ccgctgacgacgagcgaggtggctgaggcactcgacctcggtcgacggagcacgtacgac
agactggaccgactcgtggacgccgatgaactacgcacgaagaaggtcggcgcgagcgcg
cgcgtctggtggcggaacgacacaggtgacgccgctctacctgacgctaaaatcgctgac
gcctcgacgaacggagccagtaccgatgcgggagcgggtgcggtcgagaatcccccgctc
gtggacgtgctcgagtcctcgccgaccggcgtggcggcgttcgcggacgacggcacgtgc
gcgaccgccaacgagcagttccggacgctgttcgggctcgacggcgacgtctcgctcgag
gctctcgaagcggtgccgttgaccgaccacgacggtgacgtgatcggcgccgccgaccga
ccggttcgtcgagttcgtaggacgaaccgtccggtcgtcgacgagcacgtacgcgtcgac
accgacgacgggcatcgatgggtgtcgatgactgtacaggagtccgacgacggagtcgtc
gtcacggcgtcggacgtgacgggcgtcgtcgaacggtcgcgtcgactgcgacgggagcgt
gacgctgtcgcggccgagctatcggagttcgcgtcccacgcggtcgacagccgactgaag
ctggacgaagacgggacggtgctgtccgtcgacgaccgtgccgcggcactcctcgaaccg
gacgtggtagaactcgtcggtgcgtcgacgagcgaggcgttcgatgcactcaggggcgca
agcgcgatcgtcgacgcggcgctcgagtcggagtcgaagcagacgggcgactgtcggcac
ggcgaccgcgacgcgtggttcgaggtcgaggccgtcccgacgacctcgggcgcgtccgtg
ttgctccgggaggtcaccgaacaggtggagcacgaacgcgaactccagcggtacgtcggc
gtggtcgacgcactcggcgaaccggtgtacgagctcgatagcgaaggccggttcgcgttc
gtcaacgacgccatcacggagctctcggggtactcgcgcgaggaactgctcggcgagcac
gtgtcgctcgtgataccggacgatgccgtggaccgcatcgagccgcagatcagcgaactc
ttgacggaggacgccccggaccgagtgcgctcggagtaccacgtgaccacgaagcgcggg
cacgcagtgcccgtcgagaaccggttgacggtgctcacggacgaagcggggaacgtccgc
gggaacgccggcttcgtcagcgacatcactgaacgcaaggaacgagagcgggaactggag
cgctacgagcgcatcgtcgagacggtcgaggacggcatctacgtgctcgaccaggaggac
cgtttcgtcgtcgtgaacgacgcgttcgcgtcgatggctggcgtcgacggcgaggatatc
atcggccagaaggcgtccatcgtcttcgacgagacgttcgcggagcgagtgaacgacagg
aatgcggcgctgtcagcggacacgctcgagagcgcgaagttcgaagagacgttcgcgccg
gtcgacggcgacccgctcgtggtggagacgcggttcacgacgttcgcgtccaaggacggg
aacaccggacgcgtcggtgtggtgcgggacgtcggggagcgcgtcgagcgggaacgacgc
atcgaacgccagcgggcgcgtctcgaggcgctcaacgaggtgaacgcggtggttcgcgac
gtcgcgacgggagccatcgacgggtcaactcgcgaggagatcgagacgatggtctgcaag
cgtctcgccgcgtcgaacgcctacgagttcgcgtggatcggggagatgactggcgtcgac
gggtcgctcgccgtccgaaccgcggcgggtctcgacgacccggaccgcgcttcgctgtcg
gggatgctcgagggagtccgtggtcgcggtgcggtatctcgtgcggtccgcgaccggacg
gcacagacggtccaggacgcgtcgttgttgccgacgtcggacccatggcgggcgctcgcc
gccaggttcgggttccggtcggcgatggcgatcccgataacgcacgacggccggatgttc
ggcgtcctgaacgtgcataccgaccgggagtccgcgttcgctgacgaggaacgacgcctc
gtggagcacatcggtgaggtcgtcgggcacgcgatcgcggccgtggagcgcaagcgtgcg
ctcgcgagcgaagccgtcctggaactggactatcgggtgccgagggcgttctcgtcgctc
gacgtctccgagtcgctgtcgggcacgctcacgttcgacgagacggtgtcgacgaagggc
gatgaggtgctcgtgtacggaacggcgtcgccgacggcgatggagtcgctggcgtccctc
gtcgacgaggtaccgtactgggagtcggtgtcggtcgtcgacaccgacgaggccggtaac
tcgaagttcgagttgcacgcgaaggaaccacccgtgttctcgatggtgacggcacgcggc
gggtacgtggacgaggtcgtgaccgtggacggcaactccaggttcgtgttgcacgtgccg
cccggacaggacgtccgtgcgatcactgagggggtgtcggcggcgtatccgtcggcggaa
ctcgtcgctcagcggcagatatctccatcgcagccgtcgatggcgagactccaggaccgt
atcgcggaggatctcacggaccgtcagcgtgccgctctgtatgcggcgtaccactcgggg
ttcttcgagtggccgcgagcggcgaccggcgaggacgtcgcagagtcgctcggggtggca
ccgccaacgttcaaccaacacatcaggaaggcggagcggaaggtgttcgaggcgctactg
ggggaggggggcgaggagtcctcgggttggactgacaccgagtag
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