Halosquirtibacter laminarini: K4L44_02280
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Entry
K4L44_02280 CDS
T10546
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hlam Halosquirtibacter laminarini
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlam03019
]
K4L44_02280
03009 Ribosome biogenesis [BR:
hlam03009
]
K4L44_02280
Messenger RNA biogenesis [BR:
hlam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K4L44_02280
Ribosome biogenesis [BR:
hlam03009
]
Prokaryotic type
rRNA processing factors
K4L44_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QZE14709
LinkDB
All DBs
Position
560361..561908
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AA seq
515 aa
AA seq
DB search
MSNELVIEINPSQVEIAYLEDKRLVELNRETSDAKFAVGDIYLGKVKKIMPGLNAAFVDV
GYEKDAFLHYPDLGPQFQTLNKFLIQSTSKGKKPVSMNKIQSDPDIFKEGKITDVLHSGQ
LILVQISKEPISTKGPRLTSEISIAGRNLVLMPFSDKVSISQKIKSSDERSRLRKLIQSI
RPKKYGVIVRTAAEGSKVAELDKELRSLVAKWEAVPGKLKQAKVPSLVAGELDRTITMIR
DVYNPDFTNIYVNDKQSAGEVKDYVASIAPEKQKIVKHYSGDAPIFEHFGIEKQIKALFG
KTVSFKSGAYLIIEHTEAFHVIDVNSGNRSKAGSDQETNALEVNMAAAVEIARQLRLRDM
GGIIVVDFIDMHSNENRIKVLEKMREEMSKDRTKHNILPLSKFCLMQITRQRVRPEMHIE
TAEKCPTCNGTGEVSSTLLLVDEVFNNLKYIYLELFRKNVKIHLHPFIAAYLTSGIVSRH
MKWMWCLKKRFKIVPKTNMGFLDCKFYDNDGEIVL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatgaactggtaattgaaataaatccatctcaagtggagattgcttacttagag
gataaacgccttgttgaactcaatcgggaaaccagtgatgcaaagtttgcagtaggtgat
atctatcttggaaaagtgaagaagataatgcctgggctaaatgctgcgtttgttgatgtg
ggatacgagaaggatgctttccttcattaccctgatctaggaccacaattccaaacatta
aacaaatttcttatacagtcgacgtctaagggtaagaaacctgtgtcgatgaataaaata
cagtcggaccctgatatttttaaggaaggaaaaattactgatgtgttgcattctggtcag
ttgatcttggttcagatatccaaagagccaatatcaaccaaaggaccgcgtttaacatca
gagatctctattgcagggagaaacctagtactaatgccatttagtgataaggtgtcaatc
tcgcaaaaaattaagtcaagcgacgagagaagtcgtttgcgcaaattgattcaaagtatt
cgacctaaaaaatacggtgttattgttcgaactgcagcagaaggaagtaaagttgcagag
ttagataaagagttacgttctttagtcgctaaatgggaagctgttcctggaaagctaaaa
caagccaaagttccatctttggtagcaggcgaattggatcgtacaataacaatgatccgt
gatgtatacaatcccgactttactaatatttatgtgaatgacaaacagtctgctggagag
gtaaaagattatgttgcaagcatagcacctgaaaagcagaagattgttaagcattatagt
ggtgatgctcccatttttgagcattttggaattgagaaacagattaaggcactttttgga
aagaccgtgtcgttcaagagtggtgcttacttgattatagagcatacagaggcatttcac
gttatcgatgtgaatagcggaaatcgttctaaggctggaagtgatcaagagaccaatgct
ctcgaggtaaatatggcagcagctgtagagattgcaagacaactccgtctacgtgatatg
ggagggattattgtggttgactttattgatatgcatagtaacgagaatcgaattaaggtt
cttgagaagatgcgtgaagagatgagtaaagatcgaacaaagcacaatattcttccgttg
agtaaattctgtttgatgcagattacgaggcagcgtgttcgtcctgaaatgcatattgaa
acagctgaaaaatgtcctacttgtaacggaacaggagaggtttcttctactttgttgttg
gtggatgaggtctttaataatctcaagtatatctaccttgaattgtttaggaaaaatgtt
aaaatacatttacacccatttattgcagcctatttgacaagtggtattgtttctaggcat
atgaagtggatgtggtgcctaaaaaagcgattcaaaatagtcccaaaaacgaatatggga
ttcttagattgtaagttttatgacaacgatggagaaattgttctttaa
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