Halosquirtibacter laminarini: K4L44_07560
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Entry
K4L44_07560 CDS
T10546
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hlam Halosquirtibacter laminarini
Pathway
hlam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K4L44_07560 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlam03400
]
K4L44_07560 (nfo)
Enzymes [BR:
hlam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
K4L44_07560 (nfo)
DNA repair and recombination proteins [BR:
hlam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K4L44_07560 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
CFAP58_CC
Motif
Other DBs
NCBI-ProteinID:
QZE15679
LinkDB
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Position
complement(1884266..1885111)
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AA seq
281 aa
AA seq
DB search
MTKYIGAHVSAAGGVENAPLNAAKLGATSFALFTKNQRQWAAKPFTQEQIEKFKQNCKDA
GYTPSQILPHDSYLINLGHPEQTALEKSRNAFLDELQRCEQLGLDRLNFHPGSHLKKISE
EECMDRIAESINWALKQTSGVCAVIENTAGQGSNMGFKFEHLAYIIDRVEDKTRVGVCID
TCHAFTSGYDLSSRDAASETFDLFGEIVGFKYLKGMHLNDSKKELGTRVDRHESLGKGFI
GMDAFDYIMKSERFEEIPMVLETPNSDIWTEEIAQLKEMVR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatatattggagcacatgtgagtgcagcaggaggggttgagaatgcacctctc
aatgctgcaaaattgggcgcaacctcttttgctctttttacaaagaatcaaagacaatgg
gctgcaaaaccatttacacaagaacagattgaaaagtttaaacagaattgtaaggatgca
ggatatactccttcacaaatcttgcctcatgatagctatttaatcaatttaggtcatcct
gaacaaacagcgttggagaagtctcgtaatgcttttttagatgaacttcagcgttgtgaa
cagctaggacttgatcgtttgaactttcatccaggaagccatctgaagaagatttctgaa
gaggagtgtatggatcgtattgcagaatctatcaattgggctctaaaacaaactagtggt
gtctgtgcagtgattgaaaatacagcggggcaaggttcgaatatgggcttcaaatttgag
catttggcgtatattattgatcgtgtagaagataagactagagttggtgtatgtattgat
acttgtcatgcttttacctctggttacgacttatcaagtagagatgctgcaagcgaaaca
ttcgatctctttggtgaaatcgttgggttcaaatatcttaaagggatgcatctaaatgac
tcaaaaaaggaactaggaactcgtgtggatagacatgaatctcttggtaaaggatttatt
ggaatggatgctttcgattatattatgaagtctgaacgattcgaagagatacctatggtt
cttgaaacacctaattcggatatatggacagaggagattgctcaattgaaggagatggtg
agatga
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