KEGG   Halosquirtibacter laminarini: K4L44_10285
Entry
K4L44_10285       CDS       T10546                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
hlam  Halosquirtibacter laminarini
Pathway
hlam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hlam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K4L44_10285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hlam03021]
    K4L44_10285
Transcription machinery [BR:hlam03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K4L44_10285
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 GerE Sigma70_ECF Sigma70_r4 HTH_24 HTH_23 DUF496 DUF7123
Other DBs
NCBI-ProteinID: QZE12976
UniProt: A0AC61NI07
LinkDB
Position
complement(2625651..2626238)
AA seq 195 aa
MNDNLEHIIISLNRKDRGAFNDVFELLYPRLLGFANEYIDIDDAKNIVQDAFVTLWNKNP
HFNNKFQLQSYLYTIVKNSSLYLIRKNKIRLKYRDREEKLFQTNIHIDALKNLDTTSITF
KEINNIINDTVNNLPDRCRDIFLLSRESGLKNREIAEDLDISIKTVEANITKALKILSKE
LVDYLLLVSVFLLNR
NT seq 588 nt   +upstreamnt  +downstreamnt
atgaatgataatttagaacatataattatatcactgaatagaaaggatcgaggtgcattt
aatgatgtgtttgaattattgtaccctagacttttgggctttgcaaatgaatatatagac
attgatgatgccaagaatattgtgcaagatgcctttgtaactttgtggaataaaaatcct
catttcaataataagtttcaacttcaaagttatctctatacaatagtcaagaatagtagt
ctataccttattcgcaaaaataaaattcgtttaaagtatcgagatagagaagaaaaacta
tttcaaaccaatattcatattgatgcacttaaaaacttagacactacctcgatcactttc
aaagagattaacaatatcataaacgacaccgtgaataatctcccggatagatgccgagat
atatttcttttaagtagagaatctggtttgaagaatcgagagattgctgaagacctagat
atctccattaaaacggtggaggcaaatattacaaaggctctaaaaatattaagtaaagag
ttggtggattatctcctattggtttcagtttttcttctgaatcgctaa

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