Halosquirtibacter laminarini: K4L44_10285
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Entry
K4L44_10285 CDS
T10546
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hlam Halosquirtibacter laminarini
Pathway
hlam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K4L44_10285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlam03021
]
K4L44_10285
Transcription machinery [BR:
hlam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K4L44_10285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_23
DUF496
DUF7123
Motif
Other DBs
NCBI-ProteinID:
QZE12976
UniProt:
A0AC61NI07
LinkDB
All DBs
Position
complement(2625651..2626238)
Genome browser
AA seq
195 aa
AA seq
DB search
MNDNLEHIIISLNRKDRGAFNDVFELLYPRLLGFANEYIDIDDAKNIVQDAFVTLWNKNP
HFNNKFQLQSYLYTIVKNSSLYLIRKNKIRLKYRDREEKLFQTNIHIDALKNLDTTSITF
KEINNIINDTVNNLPDRCRDIFLLSRESGLKNREIAEDLDISIKTVEANITKALKILSKE
LVDYLLLVSVFLLNR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataatttagaacatataattatatcactgaatagaaaggatcgaggtgcattt
aatgatgtgtttgaattattgtaccctagacttttgggctttgcaaatgaatatatagac
attgatgatgccaagaatattgtgcaagatgcctttgtaactttgtggaataaaaatcct
catttcaataataagtttcaacttcaaagttatctctatacaatagtcaagaatagtagt
ctataccttattcgcaaaaataaaattcgtttaaagtatcgagatagagaagaaaaacta
tttcaaaccaatattcatattgatgcacttaaaaacttagacactacctcgatcactttc
aaagagattaacaatatcataaacgacaccgtgaataatctcccggatagatgccgagat
atatttcttttaagtagagaatctggtttgaagaatcgagagattgctgaagacctagat
atctccattaaaacggtggaggcaaatattacaaaggctctaaaaatattaagtaaagag
ttggtggattatctcctattggtttcagtttttcttctgaatcgctaa
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