Halosquirtibacter laminarini: K4L44_10465
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Entry
K4L44_10465 CDS
T10546
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hlam Halosquirtibacter laminarini
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlam03009
]
K4L44_10465 (rimO)
Enzymes [BR:
hlam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K4L44_10465 (rimO)
Ribosome biogenesis [BR:
hlam03009
]
Prokaryotic type
ribosomal protein modification factors
K4L44_10465 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
DUF5666
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QZE13011
LinkDB
All DBs
Position
2680606..2681901
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AA seq
431 aa
AA seq
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MNKKVNIVTLGCSKNLIDSELFMGQLEANGYEVITDSNETDADIVAINTCGFILDAKEES
INTILDFVEAKKRGDVSKIFVFGCLTERYKDELMAEIPEVDGFYGKFQVKKMVEDLEGEY
KMSLKNQRYVTTPSHYAFLKISEGCNRTCSYCAIPYITGKHKSRPIEDIVIEATLLAKKG
VKELLVIAQDLSFYGLDLYKEQRLAELVRQLAKIEGIEWIKLHYAYPSNFPYDLLPVMQQ
ESKVSLYLDIALQHISDNMLKLMRRNINKEETLALLARIRKEVPGIHLRTTLLVGHPGET
EEDFNELCEFVETARFERLGVFAYSHEDNTYAGENYEDIIVEETKQARVEKIMELQQNVS
LLHNEQKVGKDLKVVIDRVEGDLYIARTEFDSPDVDGEVFVKSDRELSIGEFVKVHVTEA
ADYDLYAEIIE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaggtaaatattgttacattaggttgttccaagaatctaattgattcagaa
ctatttatgggtcaacttgaagcgaacggatatgaagtaataaccgattcgaatgaaaca
gatgctgatattgtggcaatcaacacttgtggattcattttggatgcaaaagaagagtct
attaatactatcttagacttcgtagaagcaaaaaaacgtggagatgtatctaaaatattc
gtttttggatgtcttacagagagatataaagatgaattgatggctgaaattcctgaagtg
gatggcttttatggaaagttccaggtaaaaaagatggtagaagatcttgagggagaatac
aaaatgagcctaaagaatcaacgttatgttacgactccttctcactacgcattcttaaaa
atatctgaaggttgtaataggacttgctcctattgtgccatcccatatatcacagggaaa
cacaaatcaagacccatagaggacatcgtaatcgaagcaacacttcttgcaaaaaaaggg
gtgaaagagttacttgtaatcgcacaagatctctctttttatggattagacttatataaa
gagcaacgtttggctgaactcgttcgtcaactagcaaaaattgagggtatagagtggatt
aagttacattatgcttatccatcaaactttccttatgatctattacctgtgatgcagcag
gagtctaaagtttctctatatcttgatatcgcactacaacatatttcagacaatatgttg
aaattaatgcgtcgtaatatcaacaaagaagagacgctagctcttttagcaagaattcgc
aaagaggtaccaggaatacatcttcgtaccacacttcttgtaggacaccctggagagact
gaggaggacttcaatgagttgtgtgaatttgttgaaacagcacgttttgaaagacttggt
gtttttgcttactctcacgaggacaatacctatgctggggagaattatgaagacattatc
gtagaagagaccaaacaggctcgtgtagaaaagattatggaactacaacaaaatgtttca
cttctgcataacgaacaaaaggttggtaaagatttaaaagtcgtaatagacagagtagaa
ggagatttatatattgcccgtacagaatttgattctccagatgtcgatggagaagtgttt
gtaaaaagtgatagagagctctctatcggtgaatttgtaaaggttcatgtaacagaagca
gcagactatgatctatacgcagagataatagaataa
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