Halosquirtibacter laminarini: K4L44_10495
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Entry
K4L44_10495 CDS
T10546
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hlam Halosquirtibacter laminarini
Pathway
hlam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K4L44_10495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlam03400
]
K4L44_10495
Enzymes [BR:
hlam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K4L44_10495
DNA repair and recombination proteins [BR:
hlam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K4L44_10495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
AAA_5
T2SSE
nSTAND3
AAA_28
AAA
Thymidylate_kin
SRP54
UvrD_C
NPHP3_N
UvrD-helicase
Rad17
PIF1
ABC_tran
AAA_17
AAA_18
MobB
NTPase_1
SLFN-g3_helicase
NACHT
AAA_16
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QZE13017
LinkDB
All DBs
Position
complement(2690966..2693398)
Genome browser
AA seq
810 aa
AA seq
DB search
MFEEHLHGVIDRITYRNEENGWTVLKVKPFDSNRTVSVVMFGEDVFVGKTFDFYGKWIQH
KTYGRQFEAKRTVEKQPETLDALRKYLGSGLISGVGPVMANKIVKRFGKDTIDILDHDIE
SLLNIPGISKSKLGKIEKTWKTHRANRQIVQFLQENNLPISYASKLIDRYGDAALDKLSN
DPYSLIEEMHGIGFIRADAIALSTGMSPQSPERVEAMVKYVLSKSKDEGNCYLLRNLIED
KLRRLDSRITTIQLDEVLETLLSKKMVMSRKVHDVIAYYDKKLYDAELSVAQKVCSLLTL
DYCNPNLDERIVFSSLEKGEDFPLSSEQRDAIESIVRCPFSILTGGPGCGKTTTLRLLVK
FLKNRKLKVMLAAPTGRAAQRMSDVVGGEAKTIHRLLAFNPMVNDFKYNEDNPLEVDFLI
VDETSMLDIELSQSLFSAIGEKTQLLFIGDVDQLPSVGAGNVLHDLIQCGKVRVHRLSSV
FRQAASSAIIRYAHELNKGEYPEIKTPFQDPMLWKNGEDCMFIDSEVATQEQTAFIRKVK
KYYASLFQEKQDIHPSNILQCDGYSWDGFEVPDKFKYADLSRIALSDSETKGLTHITKRI
SPFSSIHYGYNALDMIIRLYCNTIKQYYDSVIEIQVLTPMTKGLLGTFNLNICLQQVVNP
AKSSDVREVKVGKYVLREGDRVIQKRNNYNLEVFNGDIGYISKIADNKRKLGVTFKDKNG
TREVVYSVDDFVDLDLAYAITIHKSQGSEFDAVIIPLAFQHFTMLTKNLVYTGMTRGKRL
VVFVGNRGALRRASGNCKQEERLTYLAHLI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagagcatttacacggagtgattgaccgtattacttatcgcaatgaagaaaat
ggatggactgtattgaaagtgaaaccttttgactctaatagaaccgtatcagtggtaatg
tttggggaagatgtttttgtagggaagacctttgatttttatggtaaatggattcaacat
aagacttatggcaggcaattcgaagctaaaagaactgttgaaaaacagcctgaaacatta
gatgctttgagaaaatatttaggttctggattaattagtggggttggtcctgtgatggca
aataaaattgtcaaacgtttcggaaaagacaccattgatattctagatcatgatattgag
tcattgcttaatatccctggaatctcaaagagtaaattgggaaagattgaaaaaacgtgg
aaaacacatagggcaaatcgccagatagtacagtttcttcaagaaaataatctaccaata
agttatgcttcaaaactaatagatcgatatggagatgctgccttagataagttaagtaat
gatccttatagtttgattgaggagatgcatgggatcggatttattcgagctgatgccatc
gctctctccactggaatgtcaccacaaagtcctgaaagagttgaagcaatggtaaagtat
gttctttcaaaatcaaaagatgaagggaattgttatctgctcagaaatcttatagaagac
aaacttagacgtttagatagtcgtatcactacaatacaacttgatgaggttttagagaca
ttactttcaaaaaagatggtcatgtctagaaaggttcatgatgttatagcttactatgat
aagaaattatatgatgcagaattaagtgtagcacagaaggtttgttctcttttgactttg
gactattgcaatcccaatcttgatgaacgaatcgttttttcaagcttagaaaaaggagag
gattttcctctttcgtcagaacagcgagatgctattgagagtattgtgagatgccctttc
tcaatacttacaggaggacctggatgtggaaagactactacattaagattactcgttaag
ttcttaaagaaccgtaagttaaaggtgatgcttgctgctcctacaggaagggctgctcaa
agaatgagtgatgttgtaggaggggaggcaaagacgattcatcgtcttttggcttttaat
cctatggtcaatgattttaaatataatgaagacaaccctctggaggtcgatttcttgatt
gtcgatgagacctccatgctggatattgagctttcacagagcttattctctgccattgga
gaaaaaacacagcttctttttatcggggacgtggaccagttgccttcagtaggtgcaggg
aatgttcttcacgatttaatacagtgtggcaaagtaagagtacatcgtctatcctctgtt
tttcgtcaggcggcctccagtgctattattcgttatgcacatgagttaaataaaggagaa
taccccgagattaaaactccttttcaagatccaatgttatggaaaaatggggaggattgt
atgtttattgatagtgaagtagcaacacaagagcagactgcttttattcgaaaagtaaag
aaatattatgcctctctttttcaagagaaacaagatatacatccaagcaatatattacaa
tgtgatggttattcctgggatggttttgaagtgccagacaagtttaaatatgcagatctt
agtcggattgcattgagtgattcagaaaccaaagggttaacacatatcacgaaacgaatt
tccccattctcttctattcattatggatacaatgcactagatatgattattcgattgtat
tgtaatactattaaacagtattatgatagtgtgattgagatacaggttcttaccccaatg
actaaaggccttttaggtacttttaatcttaatatctgtttacaacaagtggttaatcct
gccaaatcgtctgatgtacgtgaggtgaaggtgggtaaatatgttttacgtgaaggtgat
cgtgtgattcaaaagcgtaacaactataacctagaggtatttaatggagatattggttat
atcagtaaaatcgcagacaataagagaaagttgggagtcacatttaaggataaaaatggg
acaagagaggttgtctatagtgttgatgattttgtagatcttgatttggcttatgccatt
acaatccacaaatctcaagggagtgagtttgatgctgtaatcattccacttgctttccaa
cactttacaatgcttacaaagaatttggtgtatacaggaatgactagaggtaaaagatta
gttgtttttgtaggaaatagaggagccttacgcagggcttcaggcaattgtaaacaggag
gagcgattgacttaccttgcccatcttatataa
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