Halosquirtibacter laminarini: K4L44_14650
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Entry
K4L44_14650 CDS
T10546
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hlam Halosquirtibacter laminarini
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlam03016
]
K4L44_14650 (truB)
Enzymes [BR:
hlam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K4L44_14650 (truB)
Transfer RNA biogenesis [BR:
hlam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K4L44_14650 (truB)
Prokaryotic type
K4L44_14650 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QZE16017
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All DBs
Position
3702262..3702969
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AA seq
235 aa
AA seq
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MDSFDFKGGEVLTFDKPLEWTSFNVVGKIRYKVCRLLGVKKLKVGHAGTLDPMATGLMVL
CTGKATKKIEQIQGTEKEYIADLKLGATTPSFDVETEEDAHFPTDHVDLEKIKSVIPQFL
GEIDQTPPIFSAVKVNGRRAYDMARKGEEVELRSKKIFIKEIEVLDFKEQHLVLRVVCGK
GTYIRSLARDFGKALESGAYLTALRRTRVGDFDVKDAYTIEAFCEMIDRAMESNK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttggattcatttgattttaagggcggtgaggtgcttacttttgacaaaccattagagtgg
acctcttttaatgtggttggaaagataagatataaagtgtgtcgactgctaggcgtaaaa
aaactaaaagtaggacatgctggaactctagacccaatggcaacaggacttatggttctt
tgcacaggtaaggcaacaaaaaaaatagagcaaattcaaggtacagagaaagagtatatt
gcggatctaaagttaggtgccacaacaccatcttttgatgtagagactgaagaagatgct
cactttcctactgaccatgtagatttggagaaaataaagtctgtcattcctcaattttta
ggagaaatagaccagactcctcctatattctctgccgtaaaggtaaatggtcgacgcgcc
tatgatatggctcgtaaaggggaagaggtagaactaaggtctaaaaaaatatttatcaaa
gagatagaagttttagattttaaagaacaacatcttgttttacgtgttgtctgtggtaaa
gggacctatatcagatcacttgctcgtgactttggtaaagcactagaaagtggggcttat
ctcacagcacttcgaagaacacgtgttggagattttgatgtaaaagatgcttatacgatt
gaagctttctgcgaaatgatagatcgtgccatggaaagcaacaaatag
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